RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CALR3Q96L12 384 aaKnown RBP12.92□□□□□ -0.34
ABCA3-203ENST00000563623 CELF4Q9BZC1 486 aaKnown RBP12.92□□□□□ -0.34
ABCA3-203ENST00000563623 CD248Q9HCU0 757 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 PGRMC1O00264 195 aaKnown RBP12.92□□□□□ -0.34
ABCA3-203ENST00000563623 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
ABCA3-203ENST00000563623 KRT13P13646 458 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 MFSD14BQ5SR56 506 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 RUFY4Q6ZNE9 571 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 RUBCNQ92622 972 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 PSTPIP2Q9H939 334 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 H2AFZP0C0S5 128 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 POTEIP0CG38 1075 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 H2AFVQ71UI9 128 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 DONSONQ9NYP3 566 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 GFPT2O94808 682 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 NOL4O94818 638 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 ITGA4P13612 1032 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 COPB2P35606 906 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 MAGOHP61326 146 aaKnown RBP12.91□□□□□ -0.34
ABCA3-203ENST00000563623 GJB7Q6PEY0 223 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 PROM2Q8N271 834 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 CUL5Q93034 780 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 MAGOHBQ96A72 148 aaKnown RBP12.91□□□□□ -0.34
ABCA3-203ENST00000563623 EDEM3Q9BZQ6 932 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
ABCA3-203ENST00000563623 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 TTI1O43156 1089 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 FLOT1O75955 427 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 NEBLO76041 1014 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 CPP00450 1065 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 XRCC5P13010 732 aaKnown RBP12.91□□□□□ -0.34
ABCA3-203ENST00000563623 CCDC26Q8TAB7 109 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 SLC24A3Q9HC58 644 aa12.91□□□□□ -0.34
ABCA3-203ENST00000563623 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.91□□□□□ -0.343e-6■■■■■ 56.1
ABCA3-203ENST00000563623 SFI1A8K8P3 1242 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 GNA14O95837 355 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
ABCA3-203ENST00000563623 E2F5Q15329 346 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 LLGL1Q15334 1064 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 UTP11Q9Y3A2 253 aaKnown RBP12.9□□□□□ -0.34
ABCA3-203ENST00000563623 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
ABCA3-203ENST00000563623 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 GCNT3O95395 438 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 LCA5LO95447 670 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 PDHBP11177 359 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 ZNF76P36508 570 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 SNAP25P60880 206 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 ASTE1Q2TB18 679 aaPredicted RBP12.9□□□□□ -0.34
ABCA3-203ENST00000563623 PRR16Q569H4 304 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 ZNF571Q7Z3V5 609 aaPredicted RBP12.9□□□□□ -0.34
ABCA3-203ENST00000563623 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 RPGRQ92834 1020 aaKnown RBP12.9□□□□□ -0.34
ABCA3-203ENST00000563623 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 INPP4AQ96PE3 977 aaPredicted RBP12.9□□□□□ -0.34
ABCA3-203ENST00000563623 TRIM51Q9BSJ1 452 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 NT5C3AQ9H0P0 336 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 GMNCA6NCL1 334 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 PHF20L1A8MW92 1017 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L10C9JJH3 530 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 G3V3G9 751 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
ABCA3-203ENST00000563623 MDM1Q8TC05 714 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 LMBR1Q8WVP7 490 aa12.9□□□□□ -0.34
ABCA3-203ENST00000563623 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 AKR1B1P15121 316 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 ZNF211Q13398 564 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 PLS1Q14651 629 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 ARHGAP44Q17R89 818 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 SPATS2Q86XZ4 545 aaKnown RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 FGGP02679 453 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 AFPP02771 609 aaKnown RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 PDIA5Q14554 519 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 CCDC25Q86WR0 208 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 SFR1Q86XK3 245 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 TRIM59Q8IWR1 403 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 SUGP1Q8IWZ8 645 aaKnown RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 RDH13Q8NBN7 331 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 CEP63Q96MT8 703 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 HGSO14964 777 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 FAM107AO95990 144 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 UCHL3P15374 230 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 FLT3P36888 993 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 ZNF572Q7Z3I7 529 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 PRPF38AQ8NAV1 312 aaKnown RBP12.89□□□□□ -0.35
ABCA3-203ENST00000563623 PIK3R5Q8WYR1 880 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 DNAJC19Q96DA6 116 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms