RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 GJA10Q969M2 543 aa32.07■■■□□ 2.72
NME3-203ENST00000563367 ZSCAN31Q96LW9 406 aaPredicted RBP32.07■■■□□ 2.72
NME3-203ENST00000563367 HSFX4A0A1B0GTS1 333 aaPredicted RBP32.06■■■□□ 2.72
NME3-203ENST00000563367 CCDC194A0A1B0GVG4 234 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 HSFX3A0A1B0GWH4 333 aaPredicted RBP32.06■■■□□ 2.72
NME3-203ENST00000563367 GRXCR1A8MXD5 290 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 NBNO60934 754 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 FOSBP53539 338 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 MBTPS1Q14703 1052 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 PLCB4Q15147 1175 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 RABEP1Q15276 862 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 GRIK4Q16099 956 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 Q4G0T1 1027 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 EARS2Q5JPH6 523 aaKnown RBP32.06■■■□□ 2.72
NME3-203ENST00000563367 ZNF746Q6NUN9 644 aaPredicted RBP32.06■■■□□ 2.72
NME3-203ENST00000563367 CCDC60Q8IWA6 550 aaPredicted RBP32.06■■■□□ 2.72
NME3-203ENST00000563367 MBOAT7Q96N66 472 aa32.06■■■□□ 2.72
NME3-203ENST00000563367 FTOQ9C0B1 505 aaKnown RBP eCLIP32.06■■■□□ 2.72
NME3-203ENST00000563367 UPF2Q9HAU5 1272 aaKnown RBP32.06■■■□□ 2.72
NME3-203ENST00000563367 MARCH8Q5T0T0 291 aa32.05■■■□□ 2.72
NME3-203ENST00000563367 DEFB123Q8N688 67 aa32.05■■■□□ 2.72
NME3-203ENST00000563367 SLC5A5Q92911 643 aa32.05■■■□□ 2.72
NME3-203ENST00000563367 BACH1O14867 736 aa32.04■■■□□ 2.72
NME3-203ENST00000563367 INSRRP14616 1297 aa32.04■■■□□ 2.72
NME3-203ENST00000563367 KRT76Q01546 638 aa32.04■■■□□ 2.72
NME3-203ENST00000563367 NR5A1Q13285 461 aa32.04■■■□□ 2.72
NME3-203ENST00000563367 MOXD1Q6UVY6 613 aa32.04■■■□□ 2.72
NME3-203ENST00000563367 RUFY4Q6ZNE9 571 aa32.04■■■□□ 2.72
NME3-203ENST00000563367 PIK3AP1Q6ZUJ8 805 aa32.04■■■□□ 2.72
NME3-203ENST00000563367 MTIF3Q9H2K0 278 aaKnown RBP32.04■■■□□ 2.72
NME3-203ENST00000563367 PTPRSQ13332 1948 aa32.04■■■□□ 2.72
NME3-203ENST00000563367 FAM205CA6NFA0 338 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 CXCL10P02778 98 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 KRT2P35908 639 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 IGBP1P78318 339 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 SWSAP1Q6NVH7 229 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 MIS18BP1Q6P0N0 1132 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 TNFRSF25Q93038 417 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 ZBTB10Q96DT7 871 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 LLPHQ9BRT6 129 aaKnown RBP32.03■■■□□ 2.72
NME3-203ENST00000563367 SH2B1Q9NRF2 756 aaPredicted RBP32.03■■■□□ 2.72
NME3-203ENST00000563367 TRPC6Q9Y210 931 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 SIP14410 1827 aa32.03■■■□□ 2.72
NME3-203ENST00000563367 EVPLQ92817 2033 aa32.02■■■□□ 2.72
NME3-203ENST00000563367 MBLAC1A4D2B0 266 aaPredicted RBP32.02■■■□□ 2.72
NME3-203ENST00000563367 ZBBXA8MT70 800 aa32.02■■■□□ 2.72
NME3-203ENST00000563367 PARNO95453 639 aaKnown RBP32.02■■■□□ 2.72
NME3-203ENST00000563367 TCTN1Q2MV58 587 aa32.02■■■□□ 2.72
NME3-203ENST00000563367 LETM2Q2VYF4 491 aa32.02■■■□□ 2.72
NME3-203ENST00000563367 FAM160B1Q5W0V3 765 aa32.02■■■□□ 2.72
NME3-203ENST00000563367 TBC1D32Q96NH3 1257 aa32.02■■■□□ 2.72
NME3-203ENST00000563367 RIT2Q99578 217 aa32.02■■■□□ 2.72
NME3-203ENST00000563367 ZNF302Q9NR11 478 aa32.02■■■□□ 2.72
NME3-203ENST00000563367 POTEB3A0JP26 581 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 RSPH10B2B2RC85 870 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 SLC37A4O43826 429 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 GAS7O60861 476 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 MMP1P03956 469 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 RSPH10BP0C881 870 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 ACTN1P12814 892 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 ATP4AP20648 1035 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 SLC26A2P50443 739 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 LRCH2Q5VUJ6 765 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 KRT40Q6A162 431 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 POTEBQ6S5H4 581 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 NEK8Q86SG6 692 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 SMAP1Q8IYB5 467 aaPredicted RBP32.01■■■□□ 2.71
NME3-203ENST00000563367 TRAPPC12Q8WVT3 735 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 DDX25Q9UHL0 483 aaKnown RBP32.01■■■□□ 2.71
NME3-203ENST00000563367 TUBE1Q9UJT0 475 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 PCDHA10Q9Y5I2 948 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 SLC4A7Q9Y6M7 1214 aa32.01■■■□□ 2.71
NME3-203ENST00000563367 RRN3P2A6NIE6 340 aa32■■■□□ 2.71
NME3-203ENST00000563367 PSMD10O75832 226 aa32■■■□□ 2.71
NME3-203ENST00000563367 CTSHP09668 335 aa32■■■□□ 2.71
NME3-203ENST00000563367 PBX2P40425 430 aa32■■■□□ 2.71
NME3-203ENST00000563367 PDXDC2PQ6P474 469 aa32■■■□□ 2.71
NME3-203ENST00000563367 ETNPPLQ8TBG4 499 aa32■■■□□ 2.71
NME3-203ENST00000563367 OSBPL7Q9BZF2 842 aa32■■■□□ 2.71
NME3-203ENST00000563367 TCEAL9Q9UHQ7 104 aa32■■■□□ 2.71
NME3-203ENST00000563367 LOXHD1Q8IVV2 1947 aa32■■■□□ 2.71
NME3-203ENST00000563367 BTBD18B2RXH4 712 aa31.99■■■□□ 2.71
NME3-203ENST00000563367 CAND2O75155 1236 aa31.99■■■□□ 2.71
NME3-203ENST00000563367 FAM161BQ96MY7 647 aa31.99■■■□□ 2.71
NME3-203ENST00000563367 TEKT3Q9BXF9 490 aa31.99■■■□□ 2.71
NME3-203ENST00000563367 PBX4Q9BYU1 374 aa31.99■■■□□ 2.71
NME3-203ENST00000563367 UNC45AQ9H3U1 944 aa31.99■■■□□ 2.71
NME3-203ENST00000563367 MTMR10Q9NXD2 777 aa31.99■■■□□ 2.71
NME3-203ENST00000563367 MAFBQ9Y5Q3 323 aaPredicted RBP31.99■■■□□ 2.71
NME3-203ENST00000563367 GTF3C3Q9Y5Q9 886 aa31.99■■■□□ 2.71
NME3-203ENST00000563367 CD2BP2O95400 341 aaKnown RBP31.98■■■□□ 2.71
NME3-203ENST00000563367 PSAPP07602 524 aa31.98■■■□□ 2.71
NME3-203ENST00000563367 TRIM29Q14134 588 aa31.98■■■□□ 2.71
NME3-203ENST00000563367 TAF2Q6P1X5 1199 aa31.98■■■□□ 2.71
NME3-203ENST00000563367 DIS3L2Q8IYB7 885 aaKnown RBP31.98■■■□□ 2.71
NME3-203ENST00000563367 ATP8B4Q8TF62 1192 aa31.98■■■□□ 2.71
NME3-203ENST00000563367 TTYH1Q9H313 450 aaPredicted RBP31.98■■■□□ 2.71
NME3-203ENST00000563367 BRMS1Q9HCU9 246 aa31.98■■■□□ 2.71
NME3-203ENST00000563367 DISC1Q9NRI5 854 aa31.98■■■□□ 2.71
NME3-203ENST00000563367 SAMM50Q9Y512 469 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms