RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 GH1P01241 217 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 MMP3P08254 477 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 HOXA13P31271 388 aaPredicted RBP11.7□□□□□ -0.54
SNX29-202ENST00000563308 HTRA4P83105 476 aaPredicted RBP11.7□□□□□ -0.54
SNX29-202ENST00000563308 WTAPQ15007 396 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 PTGISQ16647 500 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 ARHGEF16Q5VV41 709 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 RALYLQ86SE5 291 aaKnown RBP11.7□□□□□ -0.54
SNX29-202ENST00000563308 VSIG10LQ86VR7 867 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 EMID1Q96A84 441 aaPredicted RBP11.7□□□□□ -0.54
SNX29-202ENST00000563308 PDCD2LQ9BRP1 358 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 LY9Q9HBG7 655 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 TSHZ2Q9NRE2 1034 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 PNMA6FA0A0J9YX94 578 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 SRGAP2BP0DMP2 458 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 HOXD8P13378 290 aaPredicted RBP11.69□□□□□ -0.54
SNX29-202ENST00000563308 AOC1P19801 751 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 HOMER1Q86YM7 354 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 FIBCD1Q8N539 461 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 SAMD3Q8N6K7 520 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 EFHBQ8N7U6 833 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 MAP3K20Q9NYL2 800 aaKnown RBP11.69□□□□□ -0.54
SNX29-202ENST00000563308 MYO7AQ13402 2215 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 RALGAPA2Q2PPJ7 1873 aa11.69□□□□□ -0.54
SNX29-202ENST00000563308 BAZ2BQ9UIF8 2168 aaKnown RBP11.68□□□□□ -0.54
SNX29-202ENST00000563308 NLRC5Q86WI3 1866 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 WDR87Q6ZQQ6 2873 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 ERICH2A1L162 156 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 KINO60870 393 aaKnown RBP11.68□□□□□ -0.54
SNX29-202ENST00000563308 UPP2O95045 317 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 CXCL10P02778 98 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 SP100P23497 879 aaPredicted RBP11.68□□□□□ -0.54
SNX29-202ENST00000563308 SP2Q02086 613 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 GPNMBQ14956 572 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 SART3Q15020 963 aaKnown RBP11.68□□□□□ -0.54
SNX29-202ENST00000563308 PGM5Q15124 567 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 CATIPQ7Z7H3 387 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 SESTD1Q86VW0 696 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 GPKOWQ92917 476 aaPredicted RBP eCLIP11.68□□□□□ -0.54
SNX29-202ENST00000563308 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 MYL10Q9BUA6 226 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 CLEC1BQ9P126 229 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 USP18Q9UMW8 372 aa11.68□□□□□ -0.54
SNX29-202ENST00000563308 TRIP12Q14669 1992 aaPredicted RBP11.68□□□□□ -0.54
SNX29-202ENST00000563308 FRMPD4Q14CM0 1322 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 KIAA1217Q5T5P2 1943 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 GCOM1H8Y6P7 765 aaPredicted RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 RBAK-RBAKDNI3L0D1 243 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 HAS3O00219 553 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 SH2B2O14492 632 aaPredicted RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 SLC27A2O14975 620 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 GRM6O15303 877 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 PRC1O43663 620 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 BRD1O95696 1058 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 PROS1P07225 676 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 POLR2MP0CAP2 368 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 MYCLP12524 364 aaPredicted RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 ZNF200P98182 395 aaPredicted RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 LAMC2Q13753 1193 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 MYSM1Q5VVJ2 828 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNX29-202ENST00000563308 ZNF654Q8IZM8 581 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 PPTC7Q8NI37 304 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 DHX38Q92620 1227 aaKnown RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 MTA3Q9BTC8 594 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 BARX2Q9UMQ3 279 aaPredicted RBP11.67□□□□□ -0.54
SNX29-202ENST00000563308 MRVI1Q9Y6F6 885 aa11.67□□□□□ -0.54
SNX29-202ENST00000563308 MYH6P13533 1939 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 FSD2A1L4K1 749 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 DDAH1O94760 285 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 PLEKHA8P1O95397 391 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 F2P00734 622 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 CASTP20810 708 aaKnown RBP11.66□□□□□ -0.54
SNX29-202ENST00000563308 UBA1P22314 1058 aaKnown RBP11.66□□□□□ -0.54
SNX29-202ENST00000563308 SMARCA1P28370 1054 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 BMPR1AP36894 532 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 MRPS9P82933 396 aaKnown RBP11.66□□□□□ -0.54
SNX29-202ENST00000563308 TRAF1Q13077 416 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 HIC1Q14526 733 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 DGKDQ16760 1214 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 HSDL1Q3SXM5 330 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
SNX29-202ENST00000563308 CREB3L3Q68CJ9 461 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 LRSAM1Q6UWE0 723 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 FCHSD1Q86WN1 690 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 SRBD1Q8N5C6 995 aaKnown RBP11.66□□□□□ -0.54
SNX29-202ENST00000563308 PIBF1Q8WXW3 757 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 HDAC6Q9UBN7 1215 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 FBXL21Q9UKT6 434 aa11.66□□□□□ -0.54
SNX29-202ENST00000563308 EMSYQ7Z589 1322 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 C5orf67F2Z3F1 127 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms