RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NYAP2Q9P242 653 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 ARMCX3Q9UH62 379 aaPredicted RBP14.36□□□□□ -0.11
USB1-207ENST00000563149 ADAMTS1Q9UHI8 967 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 DNM3Q9UQ16 869 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 MYH4Q9Y623 1939 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 A0A087WUV0 522 aaPredicted RBP14.35□□□□□ -0.11
USB1-207ENST00000563149 SLC16A3O15427 465 aaKnown RBP14.35□□□□□ -0.11
USB1-207ENST00000563149 FOSP01100 380 aaPredicted RBP14.35□□□□□ -0.11
USB1-207ENST00000563149 GLI1P08151 1106 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 MYBP10242 640 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 ERCC3P19447 782 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 SLC16A2P36021 539 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
USB1-207ENST00000563149 GIT2Q14161 759 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 RPS6KA1Q15418 735 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 BMT2Q1RMZ1 405 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 QRICH1Q2TAL8 776 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 DPY19L2P1Q6NXN4 242 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 KCTD1Q719H9 257 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 LMBR1Q8WVP7 490 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 CRYGNQ8WXF5 182 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 CALR3Q96L12 384 aaKnown RBP14.35□□□□□ -0.11
USB1-207ENST00000563149 FAM20AQ96MK3 541 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 C8orf37Q96NL8 207 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 TRIM34Q9BYJ4 488 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 INTUQ9ULD6 942 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
USB1-207ENST00000563149 A0A0A6YYK5 440 aaPredicted RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 EBAG9O00559 213 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 MPHOSPH10O00566 681 aaKnown RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 FTCDO95954 541 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 RPL13P26373 211 aaKnown RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 GNGT1P63211 74 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 GUCY2DQ02846 1103 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 EXOC3L4Q17RC7 722 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 TTMPQ5BVD1 217 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 ETNPPLQ8TBG4 499 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 ACTRT1Q8TDG2 376 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 SPAG5Q96R06 1193 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 NFU1Q9UMS0 254 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 GRIN2DO15399 1336 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 NPHP3-ACAD11A0A0J9YXS1 232 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 GTPBP10A4D1E9 387 aaKnown RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 PPEF1O14829 653 aaPredicted RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 FLOT1O75955 427 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 GFPT2O94808 682 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 KIF4AO95239 1232 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 CPP00450 1065 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 UCHL3P15374 230 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 SPIRE1Q08AE8 756 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 CDC42EP5Q6NZY7 148 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 KDM7AQ6ZMT4 941 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 CATSPER3Q86XQ3 398 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 SPATS2Q86XZ4 545 aaKnown RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 TEX2Q8IWB9 1127 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 BCAS4Q8TDM0 211 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 SCFD2Q8WU76 684 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 ARL8AQ96BM9 186 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 CCDC43Q96MW1 224 aaKnown RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 KRT12Q99456 494 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 HINFPQ9BQA5 517 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 EFCC1Q9HA90 598 aa14.34□□□□□ -0.11
USB1-207ENST00000563149 TYW1Q9NV66 732 aaKnown RBP14.34□□□□□ -0.11
USB1-207ENST00000563149 UBR3Q6ZT12 1888 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 SRRM3A6NNA2 597 aaPredicted RBP14.33□□□□□ -0.12
USB1-207ENST00000563149 MEIS2O14770 477 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 ZEB2O60315 1214 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 XRCC5P13010 732 aaKnown RBP14.33□□□□□ -0.12
USB1-207ENST00000563149 MMP14P50281 582 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 NPEPPSP55786 919 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 ARHGAP4P98171 946 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 CUL1Q13616 776 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 LRIG3Q6UXM1 1119 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 ZNF571Q7Z3V5 609 aaPredicted RBP14.33□□□□□ -0.12
USB1-207ENST00000563149 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 CERS5Q8N5B7 392 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 CASKIN2Q8WXE0 1202 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 GJA10Q969M2 543 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 TEKT1Q969V4 418 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 MRIQ9BWK5 157 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 ZC3H12CQ9C0D7 883 aaKnown RBP14.33□□□□□ -0.12
USB1-207ENST00000563149 ISCUQ9H1K1 167 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 TAF1DQ9H5J8 278 aaPredicted RBP14.33□□□□□ -0.12
USB1-207ENST00000563149 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 NENFQ9UMX5 172 aa14.33□□□□□ -0.12
USB1-207ENST00000563149 BHMG1C9JSJ3 638 aaPredicted RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 CCDC188H7C350 402 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 PON1P27169 355 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms