RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PARP14Q460N5 1801 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 STX10O60499 249 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 MFAP3LO75121 409 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 EPHX2P34913 555 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 MTIF2P46199 727 aaKnown RBP10.43□□□□□ -0.74
LINC00838-201ENST00000562956 NYAP1Q6ZVC0 841 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 SFR1Q86XK3 245 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 KCTD17Q8N5Z5 321 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 CDCA5Q96FF9 252 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 PPP1R13BQ96KQ4 1090 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 PANX2Q96RD6 677 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 LXNQ9BS40 222 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 POLR2AP24928 1970 aaKnown RBP10.43□□□□□ -0.74
LINC00838-201ENST00000562956 IRF6O14896 467 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 ARHGAP6O43182 974 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 ATP9AO75110 1047 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 TNNT1P13805 278 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 IREB2P48200 963 aaKnown RBP10.43□□□□□ -0.74
LINC00838-201ENST00000562956 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
LINC00838-201ENST00000562956 KCTD10Q9H3F6 313 aa10.43□□□□□ -0.74
LINC00838-201ENST00000562956 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.43□□□□□ -0.74
LINC00838-201ENST00000562956 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
LINC00838-201ENST00000562956 SFI1A8K8P3 1242 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 C1orf186Q6ZWK4 172 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 MIER3Q7Z3K6 550 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 OTUD5Q96G74 571 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 NACC1Q96RE7 527 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 TSG101Q99816 390 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 NOC4LQ9BVI4 516 aaKnown RBP10.42□□□□□ -0.74
LINC00838-201ENST00000562956 A1CFQ9NQ94 594 aaKnown RBP10.42□□□□□ -0.74
LINC00838-201ENST00000562956 CYP39A1Q9NYL5 469 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 MYPNQ86TC9 1320 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 A0A1W2PQC6 194 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 ERCC3P19447 782 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 MUTP22033 750 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 DNM2P50570 870 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 FOXR2Q6PJQ5 311 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 TOGARAM2Q6ZUX3 1019 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 ZNF771Q7L3S4 317 aaPredicted RBP10.42□□□□□ -0.74
LINC00838-201ENST00000562956 VSIG10LQ86VR7 867 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 PDCL2Q8N4E4 241 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 ACAD9Q9H845 621 aa10.42□□□□□ -0.74
LINC00838-201ENST00000562956 RBBP6Q7Z6E9 1792 aaKnown RBP10.41□□□□□ -0.74
LINC00838-201ENST00000562956 SOWAHDA6NJG2 315 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 TBCAO75347 108 aaKnown RBP10.41□□□□□ -0.74
LINC00838-201ENST00000562956 NR3C2P08235 984 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 MYBP10242 640 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 HOXD13P35453 343 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 KLK7P49862 253 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 TBC1D8BQ0IIM8 1120 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 MTF1Q14872 753 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 PTPN14Q15678 1187 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 GADL1Q6ZQY3 521 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 EPM2AIP1Q7L775 607 aaPredicted RBP10.41□□□□□ -0.74
LINC00838-201ENST00000562956 CNGA4Q8IV77 575 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 TBC1D22BQ9NU19 505 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 SAMM50Q9Y512 469 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 TRAF5O00463 557 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 FGFR1OPO95684 399 aaKnown RBP10.41□□□□□ -0.74
LINC00838-201ENST00000562956 CCND2P30279 289 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 FKBP3Q00688 224 aaKnown RBP10.41□□□□□ -0.74
LINC00838-201ENST00000562956 ZC3H15Q8WU90 426 aaKnown RBP10.41□□□□□ -0.74
LINC00838-201ENST00000562956 ABHD10Q9NUJ1 306 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 BTBD7Q9P203 1132 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 COL4A3BPQ9Y5P4 624 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 PAPPA2Q9BXP8 1791 aa10.41□□□□□ -0.74
LINC00838-201ENST00000562956 A0A0G2JLL6 359 aaPredicted RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 TTC26A0AVF1 554 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 GLTPD2A6NH11 291 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 RASSF10A6NK89 507 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 RGS20O76081 388 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 CCNE2O96020 404 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 P4HBP07237 508 aaKnown RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 TPM1P09493 284 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 PPATQ06203 517 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 TRIM14Q14142 442 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 SYCP1Q15431 976 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 GPR162Q16538 588 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 VWA3BQ502W6 1294 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 EAPPQ56P03 285 aaPredicted RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 XRRA1Q6P2D8 792 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 LBX2Q6XYB7 198 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 PRRT2Q7Z6L0 340 aaPredicted RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 ANKRD13AQ8IZ07 590 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 NEK9Q8TD19 979 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 NSUN6Q8TEA1 469 aaKnown RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 MRPL44Q9H9J2 332 aaKnown RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 WDR90Q96KV7 1748 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 COL11A1P12107 1806 aaPredicted RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 PRPF6O94906 941 aaKnown RBP10.4□□□□□ -0.74
LINC00838-201ENST00000562956 KIF20AO95235 890 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 NF2P35240 595 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 RAD9BQ6WBX8 426 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 ERO1BQ86YB8 467 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 REXO1L1PQ8IX06 675 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 DESI2Q9BSY9 194 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 NDST4Q9H3R1 872 aa10.4□□□□□ -0.74
LINC00838-201ENST00000562956 ZSWIM4Q9H7M6 989 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms