RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 DOT1LQ8TEK3 1739 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 ROBO3Q96MS0 1386 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 POTEMA6NI47 508 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 KIAA0391O15091 583 aaKnown RBP8.25□□□□□ -1.09
TCF4-216ENST00000562680 AFPP02771 609 aaKnown RBP8.25□□□□□ -1.09
TCF4-216ENST00000562680 GCLCP48506 637 aaPredicted RBP8.25□□□□□ -1.09
TCF4-216ENST00000562680 NAALADL2Q58DX5 795 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 JAKMIP2Q96AA8 810 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 C2orf40Q9H1Z8 148 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 FERP16591 822 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 PRPF4BQ13523 1007 aaKnown RBP8.25□□□□□ -1.09
TCF4-216ENST00000562680 TAX1BP1Q86VP1 789 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 GAS2L3Q86XJ1 694 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 GJA10Q969M2 543 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 MTUS1Q9ULD2 1270 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 ODF2LQ9ULJ1 636 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 PPP1R9AQ9ULJ8 1098 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 DAAM1Q9Y4D1 1078 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 COL18A1P39060 1754 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 ARHGEF37A1IGU5 675 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 VEGFAP15692 232 aaPredicted RBP8.25□□□□□ -1.09
TCF4-216ENST00000562680 GTF2A2P52657 109 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 TNNC1P63316 161 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 ZNF569Q5MCW4 686 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 PADI6Q6TGC4 694 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 LRRC45Q96CN5 670 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 GPRASP2Q96D09 838 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 NAPGQ99747 312 aaPredicted RBP8.25□□□□□ -1.09
TCF4-216ENST00000562680 HAUS4Q9H6D7 363 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 PRPF6O94906 941 aaKnown RBP8.25□□□□□ -1.09
TCF4-216ENST00000562680 TMEM191BP0C7N4 346 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 CDC25AP30304 524 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 RRAGAQ7L523 313 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 CLEC10AQ8IUN9 316 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 NT5C1BQ96P26 610 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 FAM207AQ9NSI2 230 aaPredicted RBP8.25□□□□□ -1.09
TCF4-216ENST00000562680 GINS2Q9Y248 185 aa8.25□□□□□ -1.09
TCF4-216ENST00000562680 RASSF7Q02833 373 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 CERS5Q8N5B7 392 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 GOLGA1Q92805 767 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 GOLPH3LQ9H4A5 285 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 AK9Q5TCS8 1911 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 NR3C2P08235 984 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 CDC42EP1Q00587 391 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 CTTNQ14247 550 aaKnown RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 MTERF2Q49AM1 385 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 EGFL6Q8IUX8 553 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 MTMR14Q8NCE2 650 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 ZC3H15Q8WU90 426 aaKnown RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 BAATQ14032 418 aaPredicted RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 FAM47CQ5HY64 1035 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 INTS8Q75QN2 995 aaKnown RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 HOOK3Q86VS8 718 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 MYRIPQ8NFW9 859 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 CACTINQ8WUQ7 758 aaKnown RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 C7orf25Q9BPX7 421 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 EIF2AK1Q9BQI3 630 aaKnown RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 MXRA8Q9BRK3 442 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 LZTFL1Q9NQ48 299 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 DDX4Q9NQI0 724 aaKnown RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 ZNF302Q9NR11 478 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 SLC9A2Q9UBY0 812 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 PITPNM2Q9BZ72 1349 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 MEIS1O00470 390 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 SREBF1P36956 1147 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 MYL7Q01449 175 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 GRAMD1CQ8IYS0 662 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 RPGRIP1Q96KN7 1286 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 MAF1Q9H063 256 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 TYW1Q9NV66 732 aaKnown RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 JRKLQ9Y4A0 524 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 ARFGEF2Q9Y6D5 1785 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 ERCC3P19447 782 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 CNGA1P29973 690 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 XKR3Q5GH77 459 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 DYDC2Q96IM9 177 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 MROH8Q9H579 483 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 JPH1Q9HDC5 661 aaPredicted RBP8.24□□□□□ -1.09
TCF4-216ENST00000562680 GPRC5DQ9NZD1 345 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 TUBE1Q9UJT0 475 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 UBE4BO95155 1302 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 PLCH1Q4KWH8 1693 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 CRYBG1Q9Y4K1 1723 aa8.24□□□□□ -1.09
TCF4-216ENST00000562680 MACROD2A1Z1Q3 448 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 MFAP3P55082 362 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 ZBED6P86452 979 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 SREBF2Q12772 1141 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 SEL1L2Q5TEA6 688 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 VSTM4Q8IW00 320 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 UBL4BQ8N7F7 174 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 LXNQ9BS40 222 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 POLR3CQ9BUI4 534 aaPredicted RBP8.23□□□□□ -1.09
TCF4-216ENST00000562680 IL17RBQ9NRM6 502 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 MYPNQ86TC9 1320 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 POTEB3A0JP26 581 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 POTECB2RU33 542 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 K7ERI5 159 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 PPP1R12AO14974 1030 aaPredicted RBP8.23□□□□□ -1.09
TCF4-216ENST00000562680 DNA2P51530 1060 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 COASYQ13057 564 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms