RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 SERINC5Q86VE9 423 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 RETREG2Q8NC44 543 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 ATP6V0A1Q93050 837 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 TBC1D22BQ9NU19 505 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 IGKV6D-21A0A0A0MT36 114 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 SLC37A4O43826 429 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 CKBP12277 381 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 PLCB4Q15147 1175 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 ZNF697Q5TEC3 545 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 PSRC1Q6PGN9 363 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 TRAF7Q6Q0C0 670 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 MOXD1Q6UVY6 613 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 DEFB128Q7Z7B8 93 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 NEK8Q86SG6 692 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 CCDC60Q8IWA6 550 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 CCDC155Q8N6L0 562 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 SLC5A5Q92911 643 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 GUCD1Q96NT3 240 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
CCNDBP1-203ENST00000562553 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 SELPP16109 830 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 STAT5BP51692 787 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 PPFIA1Q13136 1202 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 TRIM29Q14134 588 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 GPNMBQ14956 572 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 GRIK4Q16099 956 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 ZNF618Q5T7W0 954 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 ZNF746Q6NUN9 644 aaPredicted RBP17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 LRRC8DQ7L1W4 858 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 PLPPR4Q7Z2D5 763 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 ETNPPLQ8TBG4 499 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 TMX3Q96JJ7 454 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 BRMS1Q9HCU9 246 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 DDX25Q9UHL0 483 aaKnown RBP17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 SIP14410 1827 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 GBF1Q92538 1859 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 NRCAMQ92823 1304 aa17.41■□□□□ 0.38
CCNDBP1-203ENST00000562553 BACH1O14867 736 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 GNAT1P11488 350 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 HMGN5P82970 282 aaKnown RBP17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 KRT76Q01546 638 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 RASIP1Q5U651 963 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 LRCH2Q5VUJ6 765 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 SWSAP1Q6NVH7 229 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 MIS18BP1Q6P0N0 1132 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 RUFY4Q6ZNE9 571 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 OTOP2Q7RTS6 562 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 ZBTB10Q96DT7 871 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 C8orf76Q96K31 380 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 TEKT3Q9BXF9 490 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 UNC45AQ9H3U1 944 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 CXXC1Q9P0U4 656 aaPredicted RBP17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 TRPC6Q9Y210 931 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 UNC80Q8N2C7 3258 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 EVPLQ92817 2033 aa17.4■□□□□ 0.38
CCNDBP1-203ENST00000562553 CHMP2AO43633 222 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 GAS7O60861 476 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 PSMD10O75832 226 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 FGBP02675 491 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 INSRRP14616 1297 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 ATP4AP20648 1035 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 RFC2P35250 354 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 THPOP40225 353 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 IGBP1P78318 339 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 MARCH8Q5T0T0 291 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 SMAP1Q8IYB5 467 aaPredicted RBP17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 RPUSD2Q8IZ73 545 aaKnown RBP17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 TRAPPC12Q8WVT3 735 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 HERVK_113Q902F9 699 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 RIT2Q99578 217 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 SEMA6BQ9H3T3 888 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 ZNF302Q9NR11 478 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 TCEAL9Q9UHQ7 104 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 PTPRSQ13332 1948 aa17.39■□□□□ 0.37
CCNDBP1-203ENST00000562553 POTEB3A0JP26 581 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 DLL1O00548 723 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 WNT7AO00755 349 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 CCNT1O60563 726 aaKnown RBP17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 NBNO60934 754 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 FAM160B1Q5W0V3 765 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 PPP4R3AQ6IN85 833 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 PDXDC2PQ6P474 469 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 POTEBQ6S5H4 581 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 FAM184AQ8NB25 1140 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 KCNMB3Q9NPA1 279 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 GABBR1Q9UBS5 961 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 TUBE1Q9UJT0 475 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 SAMM50Q9Y512 469 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 PCDHA10Q9Y5I2 948 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 LOXHD1Q8IVV2 1947 aa17.38■□□□□ 0.37
CCNDBP1-203ENST00000562553 TMEM265A0A087WTH1 108 aa17.37■□□□□ 0.37
CCNDBP1-203ENST00000562553 MBLAC1A4D2B0 266 aaPredicted RBP17.37■□□□□ 0.37
CCNDBP1-203ENST00000562553 WDR64B1ANS9 1081 aa17.37■□□□□ 0.37
CCNDBP1-203ENST00000562553 PSAPP07602 524 aa17.37■□□□□ 0.37
CCNDBP1-203ENST00000562553 PFKMP08237 780 aa17.37■□□□□ 0.37
CCNDBP1-203ENST00000562553 CTSHP09668 335 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms