RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 COL5A2P05997 1499 aaPredicted RBP8.19□□□□□ -1.1
LINC01243-201ENST00000562065 TRBV23OR9-2A0A075B6M9 112 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 SH3D21A4FU49 640 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 PPP1R11O60927 126 aaPredicted RBP8.18□□□□□ -1.1
LINC01243-201ENST00000562065 GJA9P57773 515 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 GRB10Q13322 594 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 SLC9A5Q14940 896 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 VHLLQ6RSH7 139 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 CARFQ8N187 725 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 PPP1R14AQ96A00 147 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 ZBTB8AQ96BR9 441 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 BORCS6Q96GS4 357 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 MTA3Q9BTC8 594 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 BTG4Q9NY30 223 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 CLEC1BQ9P126 229 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.18□□□□□ -1.1
LINC01243-201ENST00000562065 SIT1Q9Y3P8 196 aa8.18□□□□□ -1.1
LINC01243-201ENST00000562065 KCNH1O95259 989 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 NTRK1P04629 796 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 CNR2P34972 360 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 C9orf131Q5VYM1 1079 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 GGNQ86UU5 652 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 DDX11Q96FC9 970 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 MARCH2Q9P0N8 246 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 POGKQ9P215 609 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 APEX2Q9UBZ4 518 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 NFAT5O94916 1531 aa8.17□□□□□ -1.1
LINC01243-201ENST00000562065 C7orf72A4D263 438 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 ANKRD34BA5PLL1 514 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 K7ESM1 405 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 USP19O94966 1318 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 MYOM1P52179 1685 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 DLX2Q07687 328 aaPredicted RBP8.16□□□□□ -1.1
LINC01243-201ENST00000562065 CACNB2Q08289 660 aaPredicted RBP8.16□□□□□ -1.1
LINC01243-201ENST00000562065 SMAD4Q13485 552 aaKnown RBP8.16□□□□□ -1.1
LINC01243-201ENST00000562065 NHSQ6T4R5 1651 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 METTL16Q86W50 562 aaKnown RBP8.16□□□□□ -1.1
LINC01243-201ENST00000562065 NT5DC4Q86YG4 428 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 RASGRP4Q8TDF6 673 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 RCC1LQ96I51 464 aaKnown RBP8.16□□□□□ -1.1
LINC01243-201ENST00000562065 TUBGCP6Q96RT7 1819 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 NTMQ9P121 344 aa8.16□□□□□ -1.1
LINC01243-201ENST00000562065 CCDC9Q9Y3X0 531 aaKnown RBP8.16□□□□□ -1.1
LINC01243-201ENST00000562065 PAPPAQ13219 1627 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 ABCC6O95255 1503 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 PPIP5K1Q6PFW1 1433 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 CPDO75976 1380 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 SPATA31A1Q5TZJ5 1347 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 SMARCA5O60264 1052 aaPredicted RBP8.15□□□□□ -1.1
LINC01243-201ENST00000562065 ZBTB7AO95365 584 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 SARSP49591 514 aaKnown RBP8.15□□□□□ -1.1
LINC01243-201ENST00000562065 SCRN1Q12765 414 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 EFEMP1Q12805 493 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 ZFYVE27Q5T4F4 411 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 TTLL7Q6ZT98 887 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 SHDQ96IW2 340 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 GPRC5CQ9NQ84 441 aa8.15□□□□□ -1.1
LINC01243-201ENST00000562065 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.15□□□□□ -1.1
LINC01243-201ENST00000562065 SHANK3Q9BYB0 1731 aa8.15□□□□□ -1.11
LINC01243-201ENST00000562065 CYP2C8P10632 490 aa8.14□□□□□ -1.11
LINC01243-201ENST00000562065 PLS3P13797 630 aa8.14□□□□□ -1.11
LINC01243-201ENST00000562065 DCP2Q8IU60 420 aaKnown RBP8.14□□□□□ -1.11
LINC01243-201ENST00000562065 CRACR2BQ8N4Y2 399 aaPredicted RBP8.14□□□□□ -1.11
LINC01243-201ENST00000562065 CPA5Q8WXQ8 436 aa8.14□□□□□ -1.11
LINC01243-201ENST00000562065 PRDM11Q9NQV5 511 aa8.14□□□□□ -1.11
LINC01243-201ENST00000562065 DUSP10Q9Y6W6 482 aa8.14□□□□□ -1.11
LINC01243-201ENST00000562065 CEP350Q5VT06 3117 aa8.14□□□□□ -1.11
LINC01243-201ENST00000562065 FAM208AQ9UK61 1670 aaKnown RBP8.14□□□□□ -1.11
LINC01243-201ENST00000562065 USP6P35125 1406 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 PARD3Q8TEW0 1356 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 BTAF1O14981 1849 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 QSER1Q2KHR3 1735 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 NOP56O00567 594 aaKnown RBP8.13□□□□□ -1.11
LINC01243-201ENST00000562065 ZNF827Q17R98 1081 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 TEX2Q8IWB9 1127 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 ANAPC16Q96DE5 110 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 APBA2Q99767 749 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 AP5M1Q9H0R1 490 aa8.13□□□□□ -1.11
LINC01243-201ENST00000562065 NOBOXO60393 691 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 VAMP1P23763 118 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 HDLBPQ00341 1268 aaKnown RBP8.12□□□□□ -1.11
LINC01243-201ENST00000562065 CHRNA2Q15822 529 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 MBLAC2Q68D91 279 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 POMZP3Q6PJE2 187 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 BVESQ8NE79 360 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 NGDNQ8NEJ9 315 aaKnown RBP8.12□□□□□ -1.11
LINC01243-201ENST00000562065 GPR20Q99678 358 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 SPATA6Q9NWH7 488 aaPredicted RBP8.12□□□□□ -1.11
LINC01243-201ENST00000562065 PALD1Q9ULE6 856 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 EMC9Q9Y3B6 208 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 COL24A1Q17RW2 1714 aa8.12□□□□□ -1.11
LINC01243-201ENST00000562065 CPSF1Q10570 1443 aaKnown RBP8.12□□□□□ -1.11
LINC01243-201ENST00000562065 CHD4Q14839 1912 aa8.11□□□□□ -1.11
LINC01243-201ENST00000562065 ACEP12821 1306 aa8.11□□□□□ -1.11
LINC01243-201ENST00000562065 C8BP07358 591 aa8.11□□□□□ -1.11
LINC01243-201ENST00000562065 NAT2P11245 290 aa8.11□□□□□ -1.11
LINC01243-201ENST00000562065 INSRRP14616 1297 aa8.11□□□□□ -1.11
LINC01243-201ENST00000562065 GJA8P48165 433 aa8.11□□□□□ -1.11
LINC01243-201ENST00000562065 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
LINC01243-201ENST00000562065 ETV3LQ6ZN32 361 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms