RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 INVSQ9Y283 1065 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 TCRBV16S1A1N1A0A5B0 115 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 CLASP2O75122 1294 aaKnown RBP3.59□□□□□ -1.83
CHD9-204ENST00000561869 CHGBP05060 677 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 ITGB3P05106 788 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 KRT15P19012 456 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 DNM2P50570 870 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 PLP2Q04941 152 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 SMAD2Q15796 467 aaKnown RBP3.59□□□□□ -1.83
CHD9-204ENST00000561869 CRY1Q16526 586 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 CCDC144BQ3MJ40 725 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 TM4SF20Q53R12 229 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 FIGNQ5HY92 759 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 BTBD8Q5XKL5 378 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 HHIPL2Q6UWX4 724 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 OVCH1Q7RTY7 1134 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 NPM2Q86SE8 214 aaKnown RBP3.59□□□□□ -1.83
CHD9-204ENST00000561869 NOSTRINQ8IVI9 506 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 NLGN4XQ8N0W4 816 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 NUDT10Q8NFP7 164 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 IGDCC4Q8TDY8 1250 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 NUDT11Q96G61 164 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 MAGEB10Q96LZ2 347 aaPredicted RBP3.59□□□□□ -1.83
CHD9-204ENST00000561869 DRC1Q96MC2 740 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 CELF4Q9BZC1 486 aaKnown RBP3.59□□□□□ -1.83
CHD9-204ENST00000561869 TMEM168Q9H0V1 697 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 SLC39A2Q9NP94 309 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 ZFP69BQ9UJL9 534 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 COQ6Q9Y2Z9 468 aa3.59□□□□□ -1.83
CHD9-204ENST00000561869 KCNK3O14649 394 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 PLD2O14939 933 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 GSTA4O15217 222 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 RAPGEF3O95398 923 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 PLATP00750 562 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 CYP1A1P04798 512 aaPredicted RBP3.58□□□□□ -1.84
CHD9-204ENST00000561869 INSRRP14616 1297 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 GJA4P35212 333 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 GLRBP48167 497 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 ST5P78524 1137 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 NFE2L2Q16236 605 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 SPATS1Q496A3 300 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 FAM47CQ5HY64 1035 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 TRMT10BQ6PF06 316 aaKnown RBP3.58□□□□□ -1.84
CHD9-204ENST00000561869 ZC3H7AQ8IWR0 971 aaKnown RBP3.58□□□□□ -1.84
CHD9-204ENST00000561869 LGI4Q8N135 537 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 KLHL36Q8N4N3 616 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 CISD2Q8N5K1 135 aaKnown RBP3.58□□□□□ -1.84
CHD9-204ENST00000561869 STPG3Q8N7X2 389 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 UBXN4Q92575 508 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 TMPRSS5Q9H3S3 457 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 PIF1Q9H611 641 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 ZSWIM4Q9H7M6 989 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 L2HGDHQ9H9P8 463 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 RIC8BQ9NVN3 520 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 BTBD7Q9P203 1132 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 ARHGAP20Q9P2F6 1191 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 SFMBT1Q9UHJ3 866 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 ADAM29Q9UKF5 820 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 CNOT11Q9UKZ1 510 aaKnown RBP3.58□□□□□ -1.84
CHD9-204ENST00000561869 ATP23Q9Y6H3 246 aa3.58□□□□□ -1.84
CHD9-204ENST00000561869 MPIG6BO95866 241 aa3.57□□□□□ -1.84
CHD9-204ENST00000561869 ZBTB48P10074 688 aaPredicted RBP3.57□□□□□ -1.84
CHD9-204ENST00000561869 MECP2P51608 486 aaKnown RBP3.57□□□□□ -1.84
CHD9-204ENST00000561869 NFATC3Q12968 1075 aa3.57□□□□□ -1.84
CHD9-204ENST00000561869 ZXDCQ2QGD7 858 aaPredicted RBP3.57□□□□□ -1.84
CHD9-204ENST00000561869 FNDC3BQ53EP0 1204 aaKnown RBP3.57□□□□□ -1.84
CHD9-204ENST00000561869 ERICH6BQ5W0A0 696 aa3.57□□□□□ -1.84
CHD9-204ENST00000561869 Q6ZUG5 572 aa3.57□□□□□ -1.84
CHD9-204ENST00000561869 SH3TC2Q8TF17 1288 aa3.57□□□□□ -1.84
CHD9-204ENST00000561869 DLG3Q92796 817 aa3.57□□□□□ -1.84
CHD9-204ENST00000561869 AJUBAQ96IF1 538 aa3.57□□□□□ -1.84
CHD9-204ENST00000561869 TACO1Q9BSH4 297 aaKnown RBP3.57□□□□□ -1.84
CHD9-204ENST00000561869 FTSJ1Q9UET6 329 aa3.57□□□□□ -1.84
CHD9-204ENST00000561869 RASSF10A6NK89 507 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 PPP1R12AO14974 1030 aaPredicted RBP3.56□□□□□ -1.84
CHD9-204ENST00000561869 DNAJC8O75937 253 aaPredicted RBP3.56□□□□□ -1.84
CHD9-204ENST00000561869 NPTXRO95502 500 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 AOAHP28039 575 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 MC4RP32245 332 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 CSF2RBP32927 897 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 HERVK_113P62684 666 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 PUM1Q14671 1186 aaKnown RBP eCLIP3.56□□□□□ -1.84
CHD9-204ENST00000561869 STILQ15468 1287 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 TMEM177Q53S58 311 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 CPZQ66K79 652 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 BORAQ6PGQ7 559 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 OTOP1Q7RTM1 612 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 FAM124AQ86V42 546 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 KBTBD2Q8IY47 623 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 IGSF22Q8N9C0 903 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 MRFAP1L1Q96HT8 127 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 RNPC3Q96LT9 517 aaKnown RBP3.56□□□□□ -1.84
CHD9-204ENST00000561869 AMNQ9BXJ7 453 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 KRTAP3-1Q9BYR8 98 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 KATNBL1Q9H079 304 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 TMEM260Q9NX78 707 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 PPP4R1LQ9P1A2 415 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 B3GALT1Q9Y5Z6 326 aa3.56□□□□□ -1.84
CHD9-204ENST00000561869 H0Y858 1186 aa3.55□□□□□ -1.84
CHD9-204ENST00000561869 K7ESM1 405 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms