RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 GSTA2P09210 222 aa20.33■□□□□ 0.84
RAB40C-206ENST00000561781 SLC16A10Q8TF71 515 aa20.33■□□□□ 0.84
RAB40C-206ENST00000561781 GPAA1O43292 621 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 BAG3O95817 575 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 MAGOHP61326 146 aaKnown RBP20.32■□□□□ 0.84
RAB40C-206ENST00000561781 MTMR3Q13615 1198 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 SLC51AQ86UW1 340 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 KIAA0825Q8IV33 1275 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 IGDCC4Q8TDY8 1250 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 MAGOHBQ96A72 148 aaKnown RBP20.32■□□□□ 0.84
RAB40C-206ENST00000561781 LY9Q9HBG7 655 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 ARHGEF3Q9NR81 526 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 SPEF2Q9C093 1822 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 NCK2O43639 380 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 TRIM21P19474 475 aaKnown RBP20.32■□□□□ 0.84
RAB40C-206ENST00000561781 TTYH3Q9C0H2 523 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 PRDM16Q9HAZ2 1276 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 GPR108Q9NPR9 543 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 TMCO1Q9UM00 188 aa20.32■□□□□ 0.84
RAB40C-206ENST00000561781 TRIM49BA6NDI0 452 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 KRT16P08779 473 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 GNAZP19086 355 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 CDK17Q00537 523 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 DYDC1Q8WWB3 177 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 KRT23Q9C075 422 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 GMEB1Q9Y692 573 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 PDS5AQ29RF7 1337 aaKnown RBP20.31■□□□□ 0.84
RAB40C-206ENST00000561781 MYH10P35580 1976 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 ZFYP08048 801 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-206ENST00000561781 PDHA1P08559 390 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 ACADSP16219 412 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 DESP17661 470 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 KCNV2Q8TDN2 545 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 APPBP2Q92624 585 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 MS4A14Q96JA4 679 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 RPS6KC1Q96S38 1066 aa20.31■□□□□ 0.84
RAB40C-206ENST00000561781 NSRP1Q9H0G5 558 aaKnown RBP20.31■□□□□ 0.84
RAB40C-206ENST00000561781 UBOX5O94941 541 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 IFNAR1P17181 557 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 STAT6P42226 847 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 KLK7P49862 253 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 CUL1Q13616 776 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 CCDC82Q8N4S0 544 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 OR2W6PQ8NHA6 318 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 IFT43Q96FT9 208 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 TMEM87BQ96K49 555 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 LZTS2Q9BRK4 669 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 SPON1Q9HCB6 807 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 GALNT8Q9NY28 637 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 ZNF510Q9Y2H8 683 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
RAB40C-206ENST00000561781 FAM205CA6NFA0 338 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 H7C1D1 291 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 COPS2P61201 443 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 DEUP1Q05D60 604 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 TSNAXIP1Q2TAA8 658 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 TMEM67Q5HYA8 995 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 RNF220Q5VTB9 566 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 SGMS1Q86VZ5 419 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 RETREG2Q8NC44 543 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 IFIH1Q9BYX4 1025 aaKnown RBP20.29■□□□□ 0.84
RAB40C-206ENST00000561781 ISCUQ9H1K1 167 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 VCX3BQ9H321 246 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 VCX3AQ9NNX9 186 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.29■□□□□ 0.848e-7■■■■■ 131.9
RAB40C-206ENST00000561781 GDAQ9Y2T3 454 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 SLC12A7Q9Y666 1083 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 GRID2IPA4D2P6 1211 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 A8MUI8 341 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 PLEKP08567 350 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-206ENST00000561781 PRCPP42785 496 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 CTDSPL2Q05D32 466 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 TRADDQ15628 312 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 UAP1Q16222 522 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-206ENST00000561781 GALNTL6Q49A17 601 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 ZNF658Q5TYW1 1059 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-206ENST00000561781 CCDC42Q96M95 316 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 NDNQ99608 321 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 ABCF3Q9NUQ8 709 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 DLGAP2Q9P1A6 1054 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 STK38LQ9Y2H1 464 aa20.29■□□□□ 0.84
RAB40C-206ENST00000561781 TRIM75PA6NK02 468 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 HLTFQ14527 1009 aaKnown RBP eCLIP20.28■□□□□ 0.84
RAB40C-206ENST00000561781 LRRC24Q50LG9 513 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 OR52E8Q6IFG1 317 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 DNAJC14Q6Y2X3 702 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-206ENST00000561781 TNRC6CQ9HCJ0 1690 aaKnown RBP20.28■□□□□ 0.84
RAB40C-206ENST00000561781 POLD1P28340 1107 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 RFC5P40937 340 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 PARP10Q53GL7 1025 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 MAEAQ7L5Y9 396 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 TRIM22Q8IYM9 498 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 LZICQ8WZA0 190 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 MTRQ99707 1265 aa20.28■□□□□ 0.84
RAB40C-206ENST00000561781 IL15P40933 162 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-206ENST00000561781 MAGEA10P43363 369 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-206ENST00000561781 CASP7P55210 303 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 BNIP1Q12981 228 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 TRIM28Q13263 835 aaKnown RBP20.27■□□□□ 0.84
RAB40C-206ENST00000561781 IRGCQ6NXR0 463 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms