RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MXRA8Q9BRK3 442 aa28.91■■■□□ 2.22
NME3-202ENST00000561637 CTSHP09668 335 aa28.9■■■□□ 2.22
NME3-202ENST00000561637 SCG2P13521 617 aa28.9■■■□□ 2.22
NME3-202ENST00000561637 MARK3P27448 753 aa28.9■■■□□ 2.22
NME3-202ENST00000561637 CLK2P49760 499 aaKnown RBP28.9■■■□□ 2.22
NME3-202ENST00000561637 TOB2Q14106 344 aaPredicted RBP28.9■■■□□ 2.22
NME3-202ENST00000561637 MICAL3Q7RTP6 2002 aa28.9■■■□□ 2.22
NME3-202ENST00000561637 LMBR1Q8WVP7 490 aa28.9■■■□□ 2.22
NME3-202ENST00000561637 UIMC1Q96RL1 719 aa28.9■■■□□ 2.22
NME3-202ENST00000561637 KCNH7Q9NS40 1196 aa28.9■■■□□ 2.22
NME3-202ENST00000561637 ABHD14A-ACY1A0A1B0GW23 586 aa28.89■■■□□ 2.22
NME3-202ENST00000561637 PRR33A8MZF0 331 aa28.89■■■□□ 2.22
NME3-202ENST00000561637 CCT2P78371 535 aaKnown RBP28.89■■■□□ 2.22
NME3-202ENST00000561637 NTRK3Q16288 839 aa28.89■■■□□ 2.22
NME3-202ENST00000561637 ZBTB10Q96DT7 871 aa28.89■■■□□ 2.22
NME3-202ENST00000561637 CDHR1Q96JP9 859 aa28.89■■■□□ 2.22
NME3-202ENST00000561637 PCYT2Q99447 389 aa28.89■■■□□ 2.22
NME3-202ENST00000561637 ADAM17P78536 824 aa28.88■■■□□ 2.21
NME3-202ENST00000561637 ARHGAP4P98171 946 aa28.88■■■□□ 2.21
NME3-202ENST00000561637 ITGB3BPQ13352 177 aaPredicted RBP28.88■■■□□ 2.21
NME3-202ENST00000561637 GIMAP8Q8ND71 665 aaPredicted RBP28.88■■■□□ 2.21
NME3-202ENST00000561637 C17orf80Q9BSJ5 609 aa28.88■■■□□ 2.21
NME3-202ENST00000561637 UPF3BQ9BZI7 483 aaKnown RBP28.88■■■□□ 2.21
NME3-202ENST00000561637 ZNF215Q9UL58 517 aaPredicted RBP28.88■■■□□ 2.21
NME3-202ENST00000561637 WDFY4Q6ZS81 3184 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 hCG_1984214I3L0E3 225 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 PDIA3P30101 505 aaKnown RBP28.87■■■□□ 2.21
NME3-202ENST00000561637 SREBF1P36956 1147 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 RUFY4Q6ZNE9 571 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 FBXL16Q8N461 479 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 ZNF713Q8N859 430 aaPredicted RBP28.87■■■□□ 2.21
NME3-202ENST00000561637 RASGRP4Q8TDF6 673 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 SEPT1Q8WYJ6 367 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 EHMT1Q9H9B1 1298 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 ZSWIM6Q9HCJ5 1215 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 PPP4R2Q9NY27 417 aa28.87■■■□□ 2.21
NME3-202ENST00000561637 RSPH10B2B2RC85 870 aa28.86■■■□□ 2.21
NME3-202ENST00000561637 PARNO95453 639 aaKnown RBP28.86■■■□□ 2.21
NME3-202ENST00000561637 RSPH10BP0C881 870 aa28.86■■■□□ 2.21
NME3-202ENST00000561637 PSMA5P28066 241 aa28.86■■■□□ 2.21
NME3-202ENST00000561637 SSTR3P32745 418 aaPredicted RBP28.86■■■□□ 2.21
NME3-202ENST00000561637 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.86■■■□□ 2.21
NME3-202ENST00000561637 RUFY3Q7L099 469 aa28.86■■■□□ 2.21
NME3-202ENST00000561637 CCDC196A0A1B0GTZ2 297 aa28.85■■■□□ 2.21
NME3-202ENST00000561637 PRPF3O43395 683 aaKnown RBP28.85■■■□□ 2.21
NME3-202ENST00000561637 FOSP01100 380 aaPredicted RBP28.85■■■□□ 2.21
NME3-202ENST00000561637 IKBKEQ14164 716 aa28.85■■■□□ 2.21
NME3-202ENST00000561637 CEP55Q53EZ4 464 aa28.85■■■□□ 2.21
NME3-202ENST00000561637 PTCRAQ6ISU1 281 aaPredicted RBP28.85■■■□□ 2.21
NME3-202ENST00000561637 DBF4BQ8NFT6 615 aa28.85■■■□□ 2.21
NME3-202ENST00000561637 SLC26A6Q9BXS9 759 aa28.85■■■□□ 2.21
NME3-202ENST00000561637 AGO4Q9HCK5 861 aaKnown RBP28.85■■■□□ 2.21
NME3-202ENST00000561637 JPH1Q9HDC5 661 aaPredicted RBP28.85■■■□□ 2.21
NME3-202ENST00000561637 NLRC5Q86WI3 1866 aa28.85■■■□□ 2.21
NME3-202ENST00000561637 LGR5O75473 907 aa28.84■■■□□ 2.21
NME3-202ENST00000561637 AP3B2Q13367 1082 aa28.84■■■□□ 2.21
NME3-202ENST00000561637 GLG1Q92896 1179 aa28.84■■■□□ 2.21
NME3-202ENST00000561637 SLC9A2Q9UBY0 812 aa28.84■■■□□ 2.21
NME3-202ENST00000561637 GRXCR2A6NFK2 248 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 FAM86B1E9PN63 330 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 MEIS1O00470 390 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 FAM86B2P0C5J1 330 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 EVCP57679 992 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 PPFIA1Q13136 1202 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 FBXO22Q8NEZ5 403 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 CRYGNQ8WXF5 182 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 ZMYND12Q9H0C1 365 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 VPS54Q9P1Q0 977 aa28.83■■■□□ 2.21
NME3-202ENST00000561637 KAT6AQ92794 2004 aa28.82■■■□□ 2.2
NME3-202ENST00000561637 ESYT2A0FGR8 921 aa28.82■■■□□ 2.2
NME3-202ENST00000561637 DDX39AO00148 427 aaKnown RBP28.82■■■□□ 2.2
NME3-202ENST00000561637 DTNBO60941 627 aa28.82■■■□□ 2.2
NME3-202ENST00000561637 CCNE2O96020 404 aa28.82■■■□□ 2.2
NME3-202ENST00000561637 ACTR2P61160 394 aa28.82■■■□□ 2.2
NME3-202ENST00000561637 MKRN4PQ13434 485 aaPredicted RBP28.82■■■□□ 2.2
NME3-202ENST00000561637 GRIK4Q16099 956 aa28.82■■■□□ 2.2
NME3-202ENST00000561637 ATG2AQ2TAZ0 1938 aa28.82■■■□□ 2.2
NME3-202ENST00000561637 C5orf42Q9H799 3197 aa28.82■■■□□ 2.2
NME3-202ENST00000561637 MAFGO15525 162 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 EFCAB14O75071 495 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 IFNAR1P17181 557 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 IGBP1P78318 339 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 MARCH8Q5T0T0 291 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 NEK9Q8TD19 979 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 INSL6Q9Y581 213 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 CYP46A1Q9Y6A2 500 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 MYO7AQ13402 2215 aa28.81■■■□□ 2.2
NME3-202ENST00000561637 NFASCO94856 1347 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 EMSYQ7Z589 1322 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 NRCAMQ92823 1304 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 IGLV3-22A0A075B6J6 115 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 H3BQ06 376 aaPredicted RBP28.8■■■□□ 2.2
NME3-202ENST00000561637 GNAT1P11488 350 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 ZNF76P36508 570 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 PLEKHG4Q58EX7 1191 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 TRAPPC12Q8WVT3 735 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 SDF4Q9BRK5 362 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 SMARCAD1Q9H4L7 1026 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 ERAP1Q9NZ08 941 aa28.8■■■□□ 2.2
NME3-202ENST00000561637 CHRNA1P02708 482 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms