RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 KIF5AQ12840 1032 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 GRB10Q13322 594 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 ANKRD20A8PQ5CZ79 823 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 HAUS3Q68CZ6 603 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 TTI2Q6NXR4 508 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 CRELD2Q6UXH1 353 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 FAM228AQ86W67 206 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 SH2D3CQ8N5H7 860 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 CCHCR1Q8TD31 782 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 CUL5Q93034 780 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 CCDC47Q96A33 483 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 DHTKD1Q96HY7 919 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 NUP58Q9BVL2 599 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 THAP9Q9H5L6 903 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 HOMER3Q9NSC5 361 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 LRWD1Q9UFC0 647 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 HYOU1Q9Y4L1 999 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 LGALS16A8MUM7 142 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 EEF2P13639 858 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 CHRNA5P30532 468 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 ASIC1P78348 528 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 AMPD3Q01432 767 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 BIRC2Q13490 618 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 C8orf74Q6P047 294 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 MB21D1Q8N884 522 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 DCAF4Q8WV16 495 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 PNMA5Q96PV4 448 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 SLC24A3Q9HC58 644 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 NYAP2Q9P242 653 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 RNF14Q9UBS8 474 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 C5orf60A6NFR6 353 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 E7EVH7 732 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 EEF1GP26641 437 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 ADCY2Q08462 1091 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 PDE4DQ08499 809 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 ITGB3BPQ13352 177 aaPredicted RBP15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 PDIA5Q14554 519 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 NAA25Q14CX7 972 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 TATDN1Q6P1N9 297 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 WDR59Q6PJI9 974 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 LRIG3Q6UXM1 1119 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 WHAMMQ8TF30 809 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 NOC3LQ8WTT2 800 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 C7orf43Q8WVR3 580 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 CNKSR1Q969H4 720 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 IQCDQ96DY2 449 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 TRIM47Q96LD4 638 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 SCLT1Q96NL6 688 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 KANSL2Q9H9L4 492 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 GDF3Q9NR23 364 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 STK17AQ9UEE5 414 aa15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.3■□□□□ 0.04
RABGGTA-220ENST00000560998 ARFGEF1Q9Y6D6 1849 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 ZNF233A6NK53 670 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 USO1O60763 962 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 PAFAH1B1P43034 410 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 CCDC181Q5TID7 509 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 AP1ARQ63HQ0 302 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 DHX37Q8IY37 1157 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 ZNF483Q8TF39 744 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 HDAC7Q8WUI4 952 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 CCDC43Q96MW1 224 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 DUSP9Q99956 384 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 PSTPIP2Q9H939 334 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 BLOC1S4Q9NUP1 217 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 GMNCA6NCL1 334 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 GOLGA6L10A6NI86 522 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 PES1O00541 588 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 KRT14P02533 472 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 CCNE1P24864 410 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 STK4Q13043 487 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 AOC3Q16853 763 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 KCTD16Q68DU8 428 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 SV2BQ7L1I2 683 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 SIAH1Q8IUQ4 282 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 EIF1ADQ8N9N8 165 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 P2RX5Q93086 422 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 KDM4CQ9H3R0 1056 aa15.29■□□□□ 0.04
RABGGTA-220ENST00000560998 POTEMA6NI47 508 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 PPP1R2P41236 205 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 SLC1A4P43007 532 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 SEPT2Q15019 361 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 QRICH1Q2TAL8 776 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 OSBPL9Q96SU4 736 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 LACRTQ9GZZ8 138 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 EBF2Q9HAK2 575 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms