RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 CXCL17Q6UXB2 119 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 ANKRD33Q7Z3H0 272 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 C4orf19Q8IY42 314 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 FBXO2Q9UK22 296 aaPredicted RBP13.63□□□□□ -0.23
IRF9-211ENST00000560852 ZNF215Q9UL58 517 aaPredicted RBP13.63□□□□□ -0.23
IRF9-211ENST00000560852 PPME1Q9Y570 386 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 A0A0U1RQG5 324 aaPredicted RBP13.62□□□□□ -0.23
IRF9-211ENST00000560852 ARVCFO00192 962 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 MARCH6O60337 910 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
IRF9-211ENST00000560852 SPATA31C1P0DKV0 1188 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 ATP4AP20648 1035 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 QARSP47897 775 aaKnown RBP13.62□□□□□ -0.23
IRF9-211ENST00000560852 PSMC5P62195 406 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 SWSAP1Q6NVH7 229 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 SLC39A5Q6ZMH5 540 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 MIER3Q7Z3K6 550 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 CCDC60Q8IWA6 550 aaPredicted RBP13.62□□□□□ -0.23
IRF9-211ENST00000560852 KCNG4Q8TDN1 519 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 ATP6V0A1Q93050 837 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 GJA10Q969M2 543 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 PAWRQ96IZ0 340 aaKnown RBP13.62□□□□□ -0.23
IRF9-211ENST00000560852 NIFKQ9BYG3 293 aaKnown RBP13.62□□□□□ -0.23
IRF9-211ENST00000560852 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
IRF9-211ENST00000560852 C11orf49Q9H6J7 331 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 AZI2Q9H6S1 392 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 ZNF302Q9NR11 478 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 PKD2L1Q9P0L9 805 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 NRCAMQ92823 1304 aa13.62□□□□□ -0.23
IRF9-211ENST00000560852 ZNF862O60290 1169 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 TECP42680 631 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 PSEN2P49810 448 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 KRT85P78386 507 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 DNM1Q05193 864 aaKnown RBP13.61□□□□□ -0.23
IRF9-211ENST00000560852 ITGA7Q13683 1181 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 TARBP2Q15633 366 aaKnown RBP13.61□□□□□ -0.23
IRF9-211ENST00000560852 XKR3Q5GH77 459 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 ATP8B4Q8TF62 1192 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
IRF9-211ENST00000560852 FAM167AQ96KS9 214 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 EIF2AK1Q9BQI3 630 aaKnown RBP13.61□□□□□ -0.23
IRF9-211ENST00000560852 CCSER1Q9C0I3 900 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 ZSWIM4Q9H7M6 989 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 STARD7Q9NQZ5 370 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 LRWD1Q9UFC0 647 aa13.61□□□□□ -0.23
IRF9-211ENST00000560852 COL1A2P08123 1366 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 FRMPD3Q5JV73 1810 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 MBLAC1A4D2B0 266 aaPredicted RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 RRN3P2A6NIE6 340 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 CCDC85CA6NKD9 419 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 DDX39AO00148 427 aaKnown RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 SPTLC2O15270 562 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 HBP1O60381 514 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 CD4P01730 458 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 MYL3P08590 195 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 MFSD10Q14728 455 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 PLCB4Q15147 1175 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 KIAA0753Q2KHM9 967 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 NBPF20Q3BBV1 942 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 AXDND1Q5T1B0 1012 aaPredicted RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 HAUS3Q68CZ6 603 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 CATSPER3Q86XQ3 398 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 KRI1Q8N9T8 703 aaKnown RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 ERMNQ8TAM6 284 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 DIS3LQ8TF46 1054 aaKnown RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 CEP89Q96ST8 783 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 MMTAG2Q9BU76 263 aaKnown RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 FTOQ9C0B1 505 aaKnown RBP eCLIP13.6□□□□□ -0.23
IRF9-211ENST00000560852 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 RNPEPQ9H4A4 650 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 ANKEF1Q9NU02 776 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 TFIP11Q9UBB9 837 aaKnown RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 GABBR1Q9UBS5 961 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 GTF2IRD1Q9UHL9 959 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 KIAA0100Q14667 2235 aaKnown RBP13.6□□□□□ -0.23
IRF9-211ENST00000560852 MROH7Q68CQ1 1323 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 SCN10AQ9Y5Y9 1956 aa13.6□□□□□ -0.23
IRF9-211ENST00000560852 FAM237AA0A1B0GTK4 181 aa13.59□□□□□ -0.23
IRF9-211ENST00000560852 RPLP2P05387 115 aaKnown RBP13.59□□□□□ -0.23
IRF9-211ENST00000560852 GNAT1P11488 350 aa13.59□□□□□ -0.23
IRF9-211ENST00000560852 RBL2Q08999 1139 aa13.59□□□□□ -0.23
IRF9-211ENST00000560852 ZNF484Q5JVG2 852 aa13.59□□□□□ -0.23
IRF9-211ENST00000560852 PDXDC2PQ6P474 469 aa13.59□□□□□ -0.23
IRF9-211ENST00000560852 LEO1Q8WVC0 666 aaPredicted RBP13.59□□□□□ -0.23
IRF9-211ENST00000560852 GLG1Q92896 1179 aa13.59□□□□□ -0.23
IRF9-211ENST00000560852 NRBP2Q9NSY0 501 aa13.59□□□□□ -0.23
IRF9-211ENST00000560852 SAMM50Q9Y512 469 aa13.59□□□□□ -0.23
IRF9-211ENST00000560852 IGKV6-21A0A0C4DH24 114 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 POTEMA6NI47 508 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 ZBTB42B2RXF5 422 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 CUTAO60888 179 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 OATP04181 439 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 ZNF286BP0CG31 522 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 STK38Q15208 465 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 KRT79Q5XKE5 535 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 ADALQ6DHV7 355 aa13.58□□□□□ -0.24
IRF9-211ENST00000560852 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms