RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 FSHRP23945 695 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 PRKAR2BP31323 418 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 CCNHP51946 323 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 RHDQ02161 417 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 PTPN11Q06124 597 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 CACNB2Q08289 660 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 TRAF1Q13077 416 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 IQCB1Q15051 598 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 IFIT1BQ5T764 474 aaKnown RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 ASTLQ6HA08 431 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 AGMOQ6ZNB7 445 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 PPM1KQ8N3J5 372 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 GATAD2BQ8WXI9 593 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 ZKSCAN4Q969J2 545 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 SYTL4Q96C24 671 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 SPSB2Q99619 263 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 PLEKHA4Q9H4M7 779 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 BICC1Q9H694 974 aaKnown RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 DCTPP1Q9H773 170 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 DDX21Q9NR30 783 aaKnown RBP eCLIP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 DDX19AQ9NUU7 478 aaKnown RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 IRAK4Q9NWZ3 460 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 GPRC5BQ9NZH0 403 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 CRYL1Q9Y2S2 319 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 ANKARQ7Z5J8 1434 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 A0A1W2PP55 124 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 ECEL1O95672 775 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 LTFP02788 710 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 ADD1P35611 737 aaKnown RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 ADCYAP1R1P41586 468 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 IREB2P48200 963 aaKnown RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 MTA1Q13330 715 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 WLSQ5T9L3 541 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 KIAA1614Q5VZ46 1190 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 C16orf71Q8IYS4 520 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 PPP1R35Q8TAP8 253 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 TAAR9Q96RI9 348 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 MS4A5Q9H3V2 200 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 CLSTN2Q9H4D0 955 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 SPATS2LQ9NUQ6 558 aaKnown RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 PALD1Q9ULE6 856 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 ODF2LQ9ULJ1 636 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 SOS1Q07889 1333 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 FZD9O00144 591 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 CTNND1O60716 968 aaKnown RBP7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 GALNSP34059 522 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 PIK3CAP42336 1068 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 GRIA4P48058 902 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 PLCB4Q15147 1175 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 BEND6Q5SZJ8 279 aaPredicted RBP7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 TRIM65Q6PJ69 517 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 POTEEQ6S8J3 1075 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 USP54Q70EL1 1684 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 VASH1Q7L8A9 365 aaPredicted RBP7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 CCDC150Q8NCX0 1101 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 TRIM63Q969Q1 353 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 BAG1Q99933 345 aaPredicted RBP7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 XPO4Q9C0E2 1151 aaKnown RBP7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 ANKEF1Q9NU02 776 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 RTCBQ9Y3I0 505 aaKnown RBP7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 KCNMB2Q9Y691 235 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 FAM169AQ9Y6X4 670 aa7.46□□□□□ -1.21
TSPAN3-209ENST00000560715 PCDHGA12O60330 932 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PQBP1O60828 265 aaKnown RBP7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 N4BP1O75113 896 aaKnown RBP7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 ZKSCAN1P17029 563 aaPredicted RBP7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 CES1P23141 567 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 CHMLP26374 656 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 GRIK1P39086 918 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PRIM2P49643 509 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PPP2R2AP63151 447 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 MPP1Q00013 466 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 E2F5Q15329 346 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 MTFR1Q15390 333 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 FAM133BQ5BKY9 247 aaKnown RBP7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 IL17REQ8NFR9 667 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 DESI2Q9BSY9 194 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 IFT22Q9H7X7 185 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 DACT1Q9NYF0 836 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 CPSF2Q9P2I0 782 aaKnown RBP7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 TPCN1Q9ULQ1 816 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 TRAF6Q9Y4K3 522 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PCDHGA9Q9Y5G4 932 aaKnown RBP7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PCDHGA8Q9Y5G5 932 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PCDHGA7Q9Y5G6 932 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PCDHGA6Q9Y5G7 932 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PCDHGA3Q9Y5H0 932 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 PCDHGA2Q9Y5H1 932 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 CORINQ9Y5Q5 1042 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 RGPD1P0DJD0 1748 aa7.46□□□□□ -1.22
TSPAN3-209ENST00000560715 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 POLBP06746 335 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 PHKG2P15735 406 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 KCNC4Q03721 635 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 RRS1Q15050 365 aaKnown RBP7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 CFAP100Q494V2 611 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 HSP90B2PQ58FF3 399 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 DACT2Q5SW24 774 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 PIK3R6Q5UE93 754 aa7.45□□□□□ -1.22
TSPAN3-209ENST00000560715 RASGRP2Q7LDG7 609 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms