RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 EHHADHQ08426 723 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 CTTNQ14247 550 aaKnown RBP13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 GRB14Q14449 540 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 NCAPHQ15003 741 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 SPATA1Q5VX52 437 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 MIS18BP1Q6P0N0 1132 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 ADSSL1Q8N142 457 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 DNAJC19Q96DA6 116 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 PTPN18Q99952 460 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 ZFYVE28Q9HCC9 887 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 ANKEF1Q9NU02 776 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
AC087878.1-201ENST00000560709 LOXHD1Q8IVV2 1947 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 A0A087WWV3 80 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 ARHGEF35A5YM69 484 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 SLC15A5A6NIM6 579 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 DDX39AO00148 427 aaKnown RBP13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 ATP9AO75110 1047 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 GUCY2CP25092 1073 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 COASYQ13057 564 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 TPD52L1Q16890 204 aaPredicted RBP13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 OTUD6AQ7L8S5 288 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 GPR142Q7Z601 462 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 PLEKHH3Q7Z736 793 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 DRC7Q8IY82 874 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 GUF1Q8N442 669 aaKnown RBP13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 PORCNQ9H237 461 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 BHMT2Q9H2M3 363 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 VTA1Q9NP79 307 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 PANK4Q9NVE7 773 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 RGL1Q9NZL6 768 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 PKD2L1Q9P0L9 805 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 SEL1LQ9UBV2 794 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 NFE2L3Q9Y4A8 694 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 UTRNP46939 3433 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
AC087878.1-201ENST00000560709 ASTN1O14525 1302 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 TLR2O60603 784 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 FGFR1OPO95684 399 aaKnown RBP13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 ADORA2AP29274 412 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 ZNF75DP51815 510 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 ZNF792Q3KQV3 632 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 METTL7BQ6UX53 244 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 STXBP4Q6ZWJ1 553 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 DYMQ7RTS9 669 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 SLC17A8Q8NDX2 589 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 NELFBQ8WX92 580 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 UIMC1Q96RL1 719 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 CTAGE1Q96RT6 745 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 LCTP09848 1927 aa13.15□□□□□ -0.3
AC087878.1-201ENST00000560709 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 PEX10O60683 326 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 ATG7O95352 703 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 CCNE2O96020 404 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 PGK2P07205 417 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 SUPT20HL2P0C7V6 817 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 UBA1P22314 1058 aaKnown RBP13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 CCNE1P24864 410 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 PRCPP42785 496 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 TM4SF4P48230 202 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 ACTR2P61160 394 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 LRRC63Q05C16 580 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 GIT2Q14161 759 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 KLHL10Q6JEL2 608 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 SCFD2Q8WU76 684 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 SOCS4Q8WXH5 440 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 FGD4Q96M96 766 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 KCNG1Q9UIX4 513 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 CTNND2Q9UQB3 1225 aa13.14□□□□□ -0.31
AC087878.1-201ENST00000560709 UBE4BO95155 1302 aa13.13□□□□□ -0.31
AC087878.1-201ENST00000560709 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
AC087878.1-201ENST00000560709 IGSF9BQ9UPX0 1349 aa13.13□□□□□ -0.31
AC087878.1-201ENST00000560709 FARP2O94887 1054 aaPredicted RBP13.13□□□□□ -0.31
AC087878.1-201ENST00000560709 FAM13AO94988 1023 aa13.13□□□□□ -0.31
AC087878.1-201ENST00000560709 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
AC087878.1-201ENST00000560709 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms