RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 ZCWPW2Q504Y3 356 aa17.52■□□□□ 0.4
PBX1-219ENST00000560641 GIGYF2Q6Y7W6 1299 aaKnown RBP17.52■□□□□ 0.4
PBX1-219ENST00000560641 ZC3H3Q8IXZ2 948 aaKnown RBP17.52■□□□□ 0.4
PBX1-219ENST00000560641 ZDHHC18Q9NUE0 388 aa17.52■□□□□ 0.4
PBX1-219ENST00000560641 INTUQ9ULD6 942 aa17.52■□□□□ 0.4
PBX1-219ENST00000560641 NOC2LQ9Y3T9 749 aaKnown RBP17.52■□□□□ 0.4
PBX1-219ENST00000560641 L3MBTL1Q9Y468 752 aa17.52■□□□□ 0.4
PBX1-219ENST00000560641 ZNF142P52746 1687 aaPredicted RBP17.52■□□□□ 0.4
PBX1-219ENST00000560641 STXBP3O00186 592 aa17.52■□□□□ 0.39
PBX1-219ENST00000560641 GJB6O95452 261 aa17.52■□□□□ 0.39
PBX1-219ENST00000560641 CLTAP09496 248 aa17.52■□□□□ 0.39
PBX1-219ENST00000560641 CCNB1P14635 433 aa17.52■□□□□ 0.39
PBX1-219ENST00000560641 CCDC15Q0P6D6 951 aa17.52■□□□□ 0.39
PBX1-219ENST00000560641 LBRQ14739 615 aaKnown RBP17.52■□□□□ 0.39
PBX1-219ENST00000560641 ZFATQ9P243 1243 aa17.52■□□□□ 0.39
PBX1-219ENST00000560641 NUP98P52948 1817 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 CCDC169A6NNP5 214 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 PP2D1A8MPX8 630 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 NPTXRO95502 500 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 VIMP08670 466 aaKnown RBP17.51■□□□□ 0.39
PBX1-219ENST00000560641 FAM89AQ96GI7 184 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 PABPC3Q9H361 631 aaKnown RBP17.51■□□□□ 0.39
PBX1-219ENST00000560641 STK17AQ9UEE5 414 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 hCG_1642624A0A1W2PR95 340 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 KCNK3O14649 394 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
PBX1-219ENST00000560641 PDE6CP51160 858 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 ASIC1P78348 528 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 LRRC34Q8IZ02 419 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 ITFG2Q969R8 447 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 BZW2Q9Y6E2 419 aaKnown RBP17.51■□□□□ 0.39
PBX1-219ENST00000560641 CAND2O75155 1236 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 ABL2P42684 1182 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 COPS2P61201 443 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 DHX9Q08211 1270 aaKnown RBP17.51■□□□□ 0.39
PBX1-219ENST00000560641 CCDC178Q5BJE1 867 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 ANKRD20A2Q5SQ80 823 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 ANKRD20A1Q5TYW2 823 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 ANKRD20A3Q5VUR7 823 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 TMC4Q7Z404 712 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 TBC1D1Q86TI0 1168 aaPredicted RBP17.51■□□□□ 0.39
PBX1-219ENST00000560641 TBC1D16Q8TBP0 767 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 PNMA2Q9UL42 364 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 PCDHA6Q9UN73 950 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 PCDHA8Q9Y5H6 950 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 SCN7AQ01118 1682 aa17.51■□□□□ 0.39
PBX1-219ENST00000560641 MAST2Q6P0Q8 1798 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 TOGARAM1Q9Y4F4 1720 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 A0A087X0T9 212 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 DAPK3O43293 454 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 DIAPH2O60879 1101 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 FAM228BP0C875 321 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 ATP2A2P16615 1042 aaKnown RBP17.5■□□□□ 0.39
PBX1-219ENST00000560641 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
PBX1-219ENST00000560641 RPS6KA3P51812 740 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 CLUL1Q15846 466 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 CWF19L1Q69YN2 538 aaKnown RBP17.5■□□□□ 0.39
PBX1-219ENST00000560641 MFSD5Q6N075 450 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 DDX42Q86XP3 938 aaKnown RBP eCLIP17.5■□□□□ 0.39
PBX1-219ENST00000560641 SH3TC2Q8TF17 1288 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 IFT74Q96LB3 600 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 CEP63Q96MT8 703 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 TCP11L1Q9NUJ3 509 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 NEFHP12036 1026 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 GNAZP19086 355 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 ROR2Q01974 943 aaKnown RBP17.5■□□□□ 0.39
PBX1-219ENST00000560641 TDRD12Q587J7 1177 aaKnown RBP17.5■□□□□ 0.39
PBX1-219ENST00000560641 DUPD1Q68J44 220 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 SPDYE1Q8NFV5 336 aaPredicted RBP17.5■□□□□ 0.39
PBX1-219ENST00000560641 STMN4Q9H169 189 aaPredicted RBP17.5■□□□□ 0.39
PBX1-219ENST00000560641 NLRP2Q9NX02 1062 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 UTP11Q9Y3A2 253 aaKnown RBP17.5■□□□□ 0.39
PBX1-219ENST00000560641 ASB3Q9Y575 518 aa17.5■□□□□ 0.39
PBX1-219ENST00000560641 GNA14O95837 355 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 RXRBP28702 533 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 GBP1P32455 592 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 PLS1Q14651 629 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 C6orf118Q5T5N4 469 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 METTL13Q8N6R0 699 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 MDM1Q8TC05 714 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 PARD3BQ8TEW8 1205 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 HES6Q96HZ4 224 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 FMO2Q99518 471 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 RIOK1Q9BRS2 568 aaKnown RBP17.49■□□□□ 0.39
PBX1-219ENST00000560641 GANQ9H2C0 597 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 PRKAG3Q9UGI9 489 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 FAM187AA6NFU0 413 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 KCNJ2P63252 427 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 PNMA8AQ86V59 439 aaPredicted RBP17.49■□□□□ 0.39
PBX1-219ENST00000560641 TBC1D5Q92609 795 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.49■□□□□ 0.39
PBX1-219ENST00000560641 CPSF2Q9P2I0 782 aaKnown RBP17.49■□□□□ 0.39
PBX1-219ENST00000560641 USP15Q9Y4E8 981 aaPredicted RBP17.49■□□□□ 0.39
PBX1-219ENST00000560641 MMTAG2Q9BU76 263 aaKnown RBP17.49■□□□□ 0.39
PBX1-219ENST00000560641 ABCF3Q9NUQ8 709 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 ADAM22Q9P0K1 906 aa17.49■□□□□ 0.39
PBX1-219ENST00000560641 PACSIN2Q9UNF0 486 aaPredicted RBP17.49■□□□□ 0.39
PBX1-219ENST00000560641 BACH1O14867 736 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 UBOX5O94941 541 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms