RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 LETM2Q2VYF4 491 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 FAM109BQ6ICB4 259 aaPredicted RBP14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 SWSAP1Q6NVH7 229 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 PIK3AP1Q6ZUJ8 805 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 ZSCAN31Q96LW9 406 aaPredicted RBP14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 ZNF302Q9NR11 478 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 TUBE1Q9UJT0 475 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 POTEB3A0JP26 581 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 M0R2N6 131 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 MSH4O15457 936 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 DHX15O43143 795 aaKnown RBP14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 CHMP2AO43633 222 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 ST18O60284 1047 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 MARCH6O60337 910 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 GAS7O60861 476 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 LGR5O75473 907 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 PSAPP07602 524 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 FDPSP14324 419 aaKnown RBP14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 DNAJB2P25686 324 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 KRT2P35908 639 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 KCNJ6P48051 423 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 RBL2Q08999 1139 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 NPY5RQ15761 445 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 LRCH2Q5VUJ6 765 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 ZNF746Q6NUN9 644 aaPredicted RBP14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 PDXDC2PQ6P474 469 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 POTEBQ6S5H4 581 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 ABHD15Q6UXT9 468 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 PLPPR4Q7Z2D5 763 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 RSPH3Q86UC2 560 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 OXER1Q8TDS5 423 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 PCYT2Q99447 389 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 TEKT3Q9BXF9 490 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 MSRAQ9UJ68 235 aa14.68□□□□□ -0.06
CTDSPL2-209ENST00000560620 RRN3P2A6NIE6 340 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 CCNT1O60563 726 aaKnown RBP14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 ATG7O95352 703 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 INSRRP14616 1297 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 ATP2A2P16615 1042 aaKnown RBP14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 HOXC8P31273 242 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 SLC26A2P50443 739 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 PLCB4Q15147 1175 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 RABEP1Q15276 862 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 TRIM71Q2Q1W2 868 aaKnown RBP14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 RASIP1Q5U651 963 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 NEK8Q86SG6 692 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 CCDC60Q8IWA6 550 aaPredicted RBP14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 SMAP1Q8IYB5 467 aaPredicted RBP14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 GJA10Q969M2 543 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 LENG9Q96B70 501 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 KIF2CQ99661 725 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 SH2B1Q9NRF2 756 aaPredicted RBP14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 DDX25Q9UHL0 483 aaKnown RBP14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 PCDHA10Q9Y5I2 948 aa14.67□□□□□ -0.06
CTDSPL2-209ENST00000560620 WDR64B1ANS9 1081 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 NBNO60934 754 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 CAND2O75155 1236 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 PBX2P40425 430 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 ADAM17P78536 824 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 NR5A1Q13285 461 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 IKBKEQ14164 716 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 Q4G0T1 1027 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 TAF2Q6P1X5 1199 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 CNKSR3Q6P9H4 555 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 RUFY4Q6ZNE9 571 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 FAM184AQ8NB25 1140 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 TRAPPC12Q8WVT3 735 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 TIFAQ96CG3 184 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 ZBTB10Q96DT7 871 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 RIT2Q99578 217 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 PBX4Q9BYU1 374 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 FAM49AQ9H0Q0 323 aaPredicted RBP14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 DISC1Q9NRI5 854 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 GABBR1Q9UBS5 961 aa14.66□□□□□ -0.06
CTDSPL2-209ENST00000560620 M0QZ92 97 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 HBP1O60381 514 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 BAIAP3O94812 1187 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 MMP1P03956 469 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 RABGGTBP53611 331 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 GUCY1B3Q02153 619 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 SAFBQ15424 915 aaKnown RBP eCLIP14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 RAB30Q15771 203 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 KRT40Q6A162 431 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 MOXD1Q6UVY6 613 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 DIS3L2Q8IYB7 885 aaKnown RBP14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 DNAJB3Q8WWF6 145 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 VWCEQ96DN2 955 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 C8orf76Q96K31 380 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 NAP1L4Q99733 375 aaKnown RBP14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 LLPHQ9BRT6 129 aaKnown RBP14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 MTMR10Q9NXD2 777 aa14.65□□□□□ -0.06
CTDSPL2-209ENST00000560620 CYP3A7-CYP3A51PA0A087WV96 503 aa14.64□□□□□ -0.07
CTDSPL2-209ENST00000560620 IGKV6D-21A0A0A0MT36 114 aa14.64□□□□□ -0.07
CTDSPL2-209ENST00000560620 BTBD18B2RXH4 712 aa14.64□□□□□ -0.07
CTDSPL2-209ENST00000560620 SLC37A4O43826 429 aa14.64□□□□□ -0.07
CTDSPL2-209ENST00000560620 EDIL3O43854 480 aa14.64□□□□□ -0.07
CTDSPL2-209ENST00000560620 GCFC2P16383 781 aaKnown RBP14.64□□□□□ -0.07
CTDSPL2-209ENST00000560620 CYP3A7P24462 503 aa14.64□□□□□ -0.07
CTDSPL2-209ENST00000560620 SFNP31947 248 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms