RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 SPIRE1Q08AE8 756 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 PDIA5Q14554 519 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 EPHA7Q15375 998 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 TRIM60Q495X7 471 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 KCTD17Q8N5Z5 321 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 NEK9Q8TD19 979 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 GLG1Q92896 1179 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 FAM167AQ96KS9 214 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 UNC45AQ9H3U1 944 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 TTC12Q9H892 705 aaPredicted RBP12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 ZNF302Q9NR11 478 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 CEP131Q9UPN4 1083 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 PPME1Q9Y570 386 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 COL1A2P08123 1366 aa12.55□□□□□ -0.4
SNRPCP18-201ENST00000560619 HBP1O60381 514 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 P4HBP07237 508 aaKnown RBP12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 CLTBP09497 229 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 OR52Z1P0C646 297 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 ZNF286BP0CG31 522 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 MUTP22033 750 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 PSMC6P62333 389 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 ADAM17P78536 824 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 RBL2Q08999 1139 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 RESTQ13127 1097 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 ZNF174Q15697 407 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 FOXD4L6Q3SYB3 417 aaPredicted RBP12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 UTP14CQ5TAP6 766 aaKnown RBP12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 FOXD4L3Q6VB84 417 aaPredicted RBP12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 FAM43BQ6ZT52 329 aaPredicted RBP12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 MIER3Q7Z3K6 550 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 RAB34Q9BZG1 259 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 HDAC6Q9UBN7 1215 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 PRKAG2Q9UGJ0 569 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 SAMM50Q9Y512 469 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 IGSF9BQ9UPX0 1349 aa12.54□□□□□ -0.4
SNRPCP18-201ENST00000560619 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 MBLAC1A4D2B0 266 aaPredicted RBP12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 DDX39AO00148 427 aaKnown RBP12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 WNT7AO00755 349 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 BACH1O14867 736 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 SORBS3O60504 671 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 CAND2O75155 1236 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 LYPLA2O95372 231 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 PARNO95453 639 aaKnown RBP12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 XRCC6P12956 609 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 PSMC5P62195 406 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 ATP2C1P98194 919 aaPredicted RBP12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 SP4Q02446 784 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 PTGDRQ13258 359 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 PTK7Q13308 1070 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 TMEM266Q2M3C6 531 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 ZNF484Q5JVG2 852 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 SWSAP1Q6NVH7 229 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 PDXDC2PQ6P474 469 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 RPAINQ86UA6 219 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 CCDC60Q8IWA6 550 aaPredicted RBP12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 CAGE1Q8TC20 777 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 ATP8B4Q8TF62 1192 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 TMEM60Q9H2L4 133 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 RNPEPQ9H4A4 650 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 NRBP2Q9NSY0 501 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 ATP11BQ9Y2G3 1177 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 TELO2Q9Y4R8 837 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 PCDHB6Q9Y5E3 794 aa12.53□□□□□ -0.4
SNRPCP18-201ENST00000560619 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 SLC26A4O43511 780 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 B4GALT4O60513 344 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 PQBP1O60828 265 aaKnown RBP12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 NCLP19338 710 aaKnown RBP12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 ATP2B1P20020 1258 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 TXKP42681 527 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 QARSP47897 775 aaKnown RBP12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 PLCB4Q15147 1175 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 PTGISQ16647 500 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 XKR3Q5GH77 459 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 TAF2Q6P1X5 1199 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 C4orf19Q8IY42 314 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 EXOC8Q8IYI6 725 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 IGSF22Q8N9C0 903 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 HSD17B14Q9BPX1 270 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 NIFKQ9BYG3 293 aaKnown RBP12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 TMEM39AQ9NV64 488 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 GABBR1Q9UBS5 961 aa12.52□□□□□ -0.41
SNRPCP18-201ENST00000560619 MYH15Q9Y2K3 1946 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 TRIP12Q14669 1992 aaPredicted RBP12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 MAGEB2O15479 319 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms