RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 C8orf74Q6P047 294 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 LRRC45Q96CN5 670 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 MS4A4AQ96JQ5 239 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 PHF20Q9BVI0 1012 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 EPN3Q9H201 632 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCDC33-209ENST00000560565 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
CCDC33-209ENST00000560565 COLQQ9Y215 455 aaPredicted RBP9.42□□□□□ -0.9
CCDC33-209ENST00000560565 CCL15-CCL14A0A0B4J2E2 113 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 A0A1B0GUA9 196 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 PHF20L1A8MW92 1017 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 IGF2BP3O00425 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCDC33-209ENST00000560565 IRF6O14896 467 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CTNND1O60716 968 aaKnown RBP9.41□□□□□ -0.9
CCDC33-209ENST00000560565 N4BP1O75113 896 aaKnown RBP9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CETPP11597 493 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 ANXA13P27216 316 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 SMARCA1P28370 1054 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CCT6AP40227 531 aaKnown RBP9.41□□□□□ -0.9
CCDC33-209ENST00000560565 PRPHP41219 470 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 STAT6P42226 847 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 AFMP43652 599 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CCT5P48643 541 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 SMTNP53814 917 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 TROAPQ12815 778 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 SNAPC2Q13487 334 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 PPP2R5EQ16537 467 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CCL15Q16663 113 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 NOL9Q5SY16 702 aaKnown RBP9.41□□□□□ -0.9
CCDC33-209ENST00000560565 C10orf76Q5T2E6 689 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 RCSD1Q6JBY9 416 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CNNM4Q6P4Q7 775 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 FMNL3Q8IVF7 1028 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 ADSSL1Q8N142 457 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 NOA1Q8NC60 698 aaKnown RBP9.41□□□□□ -0.9
CCDC33-209ENST00000560565 NKX2-3Q8TAU0 364 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CCHCR1Q8TD31 782 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 FAM122AQ96E09 287 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 DYNLL2Q96FJ2 89 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 TRIM47Q96LD4 638 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 DRC1Q96MC2 740 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 NOX5Q96PH1 765 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 ERGIC2Q96RQ1 377 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 PTPN18Q99952 460 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 LZTS2Q9BRK4 669 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 ZKSCAN3Q9BRR0 538 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CFHR5Q9BXR6 569 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 KAT14Q9H8E8 782 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 PICK1Q9NRD5 415 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
CCDC33-209ENST00000560565 DONSONQ9NYP3 566 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 SYNPO2Q9UMS6 1093 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 CEP83Q9Y592 693 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 PCDHB6Q9Y5E3 794 aa9.41□□□□□ -0.9
CCDC33-209ENST00000560565 ATP8B3O60423 1300 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 IGKV6D-41A0A0C4DH26 115 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 SSU72P8A0A1W2PR75 194 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 SMIM22K7EJ46 135 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 GPR25O00155 361 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 PES1O00541 588 aaKnown RBP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 RHOBTB3O94955 611 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 SLURP2P0DP57 97 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 SHMT1P34896 483 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 CUL1Q13616 776 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 CCDC96Q2M329 555 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 VWA3BQ502W6 1294 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 FAM47AQ5JRC9 791 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 NCAPH2Q6IBW4 605 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 TATDN1Q6P1N9 297 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 CCDC121Q6ZUS5 278 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 SND1Q7KZF4 910 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 SCYL3Q8IZE3 742 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 CEP120Q8N960 986 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 RASSF8Q8NHQ8 419 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 ZNF296Q8WUU4 475 aaPredicted RBP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 BRI3BPQ8WY22 251 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 SYN2Q92777 582 aaPredicted RBP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 PCMTD1Q96MG8 357 aaPredicted RBP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 MMS19Q96T76 1030 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 MOV10L1Q9BXT6 1211 aaKnown RBP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 IRX2Q9BZI1 471 aaPredicted RBP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 VPS16Q9H269 839 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 R3HDMLQ9H3Y0 253 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 CXorf56Q9H5V9 222 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 CNOT10Q9H9A5 744 aaKnown RBP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 NHEJ1Q9H9Q4 299 aaPredicted RBP9.4□□□□□ -0.9
CCDC33-209ENST00000560565 SENP2Q9HC62 589 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 GINM1Q9NU53 330 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 TAB2Q9NYJ8 693 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 ZHX2Q9Y6X8 837 aa9.4□□□□□ -0.9
CCDC33-209ENST00000560565 TTC26A0AVF1 554 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 PJA2O43164 708 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 FKTNO75072 461 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 PPP1R37O75864 691 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 LCA5LO95447 670 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 FAM107AO95990 144 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 ATP1A1P05023 1023 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms