RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SNHG28P0DPA3 235 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 LPIN1Q14693 890 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 QRICH1Q2TAL8 776 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 CES5AQ6NT32 575 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 TSHZ1Q6ZSZ6 1077 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 THNSL1Q8IYQ7 743 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 ADGRF4Q8IZF3 695 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 FLCNQ8NFG4 579 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 LMBR1Q8WVP7 490 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 EVI5LQ96CN4 794 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 FTHL17Q9BXU8 183 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 VAT1LQ9HCJ6 419 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 PCDHGC5Q9Y5F6 944 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 MYH6P13533 1939 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 NRCAMQ92823 1304 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 DCHS1Q96JQ0 3298 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 HIP1O00291 1037 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 KRT37O76014 449 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 RGS20O76081 388 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 SEC24BO95487 1268 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 BRD1O95696 1058 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 RBM25P49756 843 aaKnown RBP10.72□□□□□ -0.69
SMAD3-215ENST00000560424 CLCN5P51795 746 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 RBM10P98175 930 aaKnown RBP10.72□□□□□ -0.69
SMAD3-215ENST00000560424 SP2Q02086 613 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 NEDD9Q14511 834 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 PGM5Q15124 567 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 DUSP6Q16828 381 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 PDE12Q6L8Q7 609 aaKnown RBP10.72□□□□□ -0.69
SMAD3-215ENST00000560424 LLGL2Q6P1M3 1020 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 MFSD6Q6ZSS7 791 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 RMDN1Q96DB5 314 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 TBC1D32Q96NH3 1257 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 AMNQ9BXJ7 453 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 EHMT1Q9H9B1 1298 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 MAP3K20Q9NYL2 800 aaKnown RBP10.72□□□□□ -0.69
SMAD3-215ENST00000560424 KIAA1671Q9BY89 1806 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 TTC3P53804 2025 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 KAT6AQ92794 2004 aa10.72□□□□□ -0.69
SMAD3-215ENST00000560424 REC8O95072 547 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 SCG2P13521 617 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 HOXB8P17481 243 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-215ENST00000560424 CHMLP26374 656 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 HSD17B4P51659 736 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 CACNA1BQ00975 2339 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 SP4Q02446 784 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 PUM1Q14671 1186 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMAD3-215ENST00000560424 TPRNQ4KMQ1 711 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 ASPRV1Q53RT3 343 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 FBXO47Q5MNV8 452 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 VPS53Q5VIR6 699 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 PLPP4Q5VZY2 271 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 ANKRD54Q6NXT1 300 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 METTL7BQ6UX53 244 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 CYFIP1Q7L576 1253 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 VSIG10LQ86VR7 867 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 IQCA1Q86XH1 822 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 TRIM50Q86XT4 487 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 KIAA2013Q8IYS2 634 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 PNMA1Q8ND90 353 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 ATP8B4Q8TF62 1192 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 NECTIN4Q96NY8 510 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 ENTPD7Q9NQZ7 604 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-215ENST00000560424 TMEM260Q9NX78 707 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 PUF60Q9UHX1 559 aaKnown RBP10.71□□□□□ -0.69
SMAD3-215ENST00000560424 TUBE1Q9UJT0 475 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 CDY2AQ9Y6F7 541 aa10.71□□□□□ -0.69
SMAD3-215ENST00000560424 PLXNA4Q9HCM2 1894 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 FGF18O76093 207 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 LMNAP02545 664 aaKnown RBP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 RPLP2P05387 115 aaKnown RBP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 FGRP09769 529 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 PARP1P09874 1014 aaKnown RBP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 PCP11498 1178 aaKnown RBP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 RFX1P22670 979 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 HOXA13P31271 388 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 CD52P31358 61 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 HAND2P61296 217 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 MGAT3Q09327 533 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 PPFIA1Q13136 1202 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 PAK2Q13177 524 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 ANGPT1Q15389 498 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 CCDC178Q5BJE1 867 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 IER5Q5VY09 327 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 RUFY4Q6ZNE9 571 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 STOX1Q6ZVD7 989 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 FCHSD1Q86WN1 690 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 SAMD3Q8N6K7 520 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 TDRD5Q8NAT2 981 aaKnown RBP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 VN1R2Q8NFZ6 395 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 DNAJB3Q8WWF6 145 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 ESR2Q92731 530 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 CASP10Q92851 521 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 GPKOWQ92917 476 aaPredicted RBP eCLIP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 GPR20Q99678 358 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 ZKSCAN3Q9BRR0 538 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms