RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 TSGA10Q9BZW7 698 aa6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 ZCCHC2Q9C0B9 1178 aaKnown RBP6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 SUGCTQ9HAC7 445 aa6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 ATP6V0A4Q9HBG4 840 aa6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 NCOA5Q9HCD5 579 aaKnown RBP6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 DDX21Q9NR30 783 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 ABHD10Q9NUJ1 306 aa6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 ZNHIT6Q9NWK9 470 aaKnown RBP6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 SAR1BQ9Y6B6 198 aa6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 CAPN7Q9Y6W3 813 aa6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 TJP1Q07157 1748 aa6.62□□□□□ -1.35
SNRPA1-209ENST00000560307 LRP6O75581 1613 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 ATRNO75882 1429 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 MAST3O60307 1309 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 KLF18A0A0U1RQI7 1052 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 A0A1W2PP55 124 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 A0A1W2PQC6 194 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 LRRC10BA6NIK2 292 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 SH2B2O14492 632 aaPredicted RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 NDUFAB1O14561 156 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 HSF2BPO75031 334 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 BMP15O95972 392 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 GYPCP04921 128 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 HSPD1P10809 573 aaKnown RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 EZRP15311 586 aaKnown RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 ERVK-24P63145 666 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 AKAP17AQ02040 695 aaKnown RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 NEXNQ0ZGT2 675 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 PWP1Q13610 501 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 CUL4BQ13620 913 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 IMMTQ16891 758 aaKnown RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 LONRF3Q496Y0 759 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 PLEKHO1Q53GL0 409 aaPredicted RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 WDR44Q5JSH3 913 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 FBXW10Q5XX13 1052 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 RCSD1Q6JBY9 416 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 IQCA1Q86XH1 822 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 FOXP4Q8IVH2 680 aaPredicted RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 MREGQ8N565 214 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 ARFGAP2Q8N6H7 521 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 EIF1ADQ8N9N8 165 aaKnown RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 NCOA7Q8NI08 942 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 PNMA5Q96PV4 448 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 GSDMAQ96QA5 445 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 ALG1Q9BT22 464 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 NOC4LQ9BVI4 516 aaKnown RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 PLVAPQ9BX97 442 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 LRRC2Q9BYS8 371 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 EPN3Q9H201 632 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 BSDC1Q9NW68 430 aaPredicted RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 PAG1Q9NWQ8 432 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 SCN11AQ9UI33 1791 aa6.61□□□□□ -1.35
SNRPA1-209ENST00000560307 CHD4Q14839 1912 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 RGPD8O14715 1765 aaPredicted RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CASZ1Q86V15 1759 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 ANKRD18BA2A2Z9 1011 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 RNF113AO15541 343 aaKnown RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 PRC1O43663 620 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 KRT86O43790 486 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 NDUFA10O95299 355 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 RARAP10276 462 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 GHRP10912 638 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 EIF2S2P20042 333 aaKnown RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 TARSP26639 723 aaKnown RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CDC27P30260 824 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CYLC1P35663 651 aaPredicted RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CDR1P51861 262 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 RCAN1P53805 252 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 NAP1L1P55209 391 aaKnown RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 TEFQ10587 303 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 NBPF9Q3BBW0 867 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 AMOTQ4VCS5 1084 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 LACTB2Q53H82 288 aaPredicted RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 RILPL1Q5EBL4 403 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 EFHC2Q5JST6 749 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CEP85LQ5SZL2 805 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 KRT40Q6A162 431 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 WWC2Q6AWC2 1192 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 PPP4R3AQ6IN85 833 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 SDE2Q6IQ49 451 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 TPTE2Q6XPS3 522 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CCDC129Q6ZRS4 1044 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CHSY3Q70JA7 882 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 NCAPG2Q86XI2 1143 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 EGFL6Q8IUX8 553 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CCDC170Q8IYT3 715 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 MAB21L3Q8N8X9 362 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CCHCR1Q8TD31 782 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CPLX3Q8WVH0 158 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 HOOK2Q96ED9 719 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 TMEM87BQ96K49 555 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 CDC5LQ99459 802 aaKnown RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 FOXP1Q9H334 677 aaPredicted RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 LIN7BQ9HAP6 207 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 KLC4Q9NSK0 619 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 AATFQ9NY61 560 aaKnown RBP eCLIP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 RNF14Q9UBS8 474 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 ADAMTS1Q9UHI8 967 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms