RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 CASQ1P31415 396 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 ARHGAP25P42331 645 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 USP14P54578 494 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 GNG11P61952 73 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 PABPC4Q13310 644 aaKnown RBP eCLIP11.76□□□□□ -0.53
DCAF11-227ENST00000560046 EPHA7Q15375 998 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 LRCH2Q5VUJ6 765 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 NEK9Q8TD19 979 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 AGBL1Q96MI9 1066 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 WDR24Q96S15 920 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 RIT2Q99578 217 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 CHP1Q99653 195 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 REEP2Q9BRK0 252 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 PDCL3Q9H2J4 239 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 MYO1AQ9UBC5 1043 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 COL4A3BPQ9Y5P4 624 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 EPN1Q9Y6I3 576 aaPredicted RBP11.76□□□□□ -0.53
DCAF11-227ENST00000560046 TLL2Q9Y6L7 1015 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 KIAA1217Q5T5P2 1943 aa11.76□□□□□ -0.53
DCAF11-227ENST00000560046 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
DCAF11-227ENST00000560046 NKRFO15226 690 aaKnown RBP eCLIP11.75□□□□□ -0.53
DCAF11-227ENST00000560046 GAS7O60861 476 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 SLITRK3O94933 977 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 NDUFA10O95299 355 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 ARP10275 920 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
DCAF11-227ENST00000560046 TBC1D10BQ4KMP7 808 aaPredicted RBP11.75□□□□□ -0.53
DCAF11-227ENST00000560046 NBPF12Q5TAG4 269 aaPredicted RBP11.75□□□□□ -0.53
DCAF11-227ENST00000560046 RINT1Q6NUQ1 792 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 C1orf186Q6ZWK4 172 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 SAMD7Q7Z3H4 446 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 SFR1Q86XK3 245 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
DCAF11-227ENST00000560046 TRIM59Q8IWR1 403 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 CCDC170Q8IYT3 715 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 ACRBPQ8NEB7 543 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 DYDC2Q96IM9 177 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 C12orf42Q96LP6 360 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 TEKT3Q9BXF9 490 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 REXO2Q9Y3B8 237 aaKnown RBP11.75□□□□□ -0.53
DCAF11-227ENST00000560046 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 PTPRFP10586 1907 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 ASTN2O75129 1339 aaPredicted RBP11.75□□□□□ -0.53
DCAF11-227ENST00000560046 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
DCAF11-227ENST00000560046 PAPPA2Q9BXP8 1791 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 EIF3CLB5ME19 914 aaKnown RBP11.74□□□□□ -0.53
DCAF11-227ENST00000560046 TRAF5O00463 557 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 PDXKO00764 312 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 VCAM1P19320 739 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 TRIM21P19474 475 aaKnown RBP11.74□□□□□ -0.53
DCAF11-227ENST00000560046 KLK7P49862 253 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 CACNB1Q02641 598 aaPredicted RBP11.74□□□□□ -0.53
DCAF11-227ENST00000560046 TUBB2AQ13885 445 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 HSP90AA2PQ14568 343 aaPredicted RBP11.74□□□□□ -0.53
DCAF11-227ENST00000560046 NFIL3Q16649 462 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 ZNF397Q8NF99 534 aaPredicted RBP11.74□□□□□ -0.53
DCAF11-227ENST00000560046 NACC1Q96RE7 527 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 EIF3CQ99613 913 aaKnown RBP11.74□□□□□ -0.53
DCAF11-227ENST00000560046 ZNF577Q9BSK1 485 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 TUBB2BQ9BVA1 445 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 BHMT2Q9H2M3 363 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 UNC45AQ9H3U1 944 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 AS3MTQ9HBK9 375 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 OLFML3Q9NRN5 406 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 AGPAT5Q9NUQ2 364 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 ZNHIT6Q9NWK9 470 aaKnown RBP11.74□□□□□ -0.53
DCAF11-227ENST00000560046 RGL1Q9NZL6 768 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 KCND2Q9NZV8 630 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 TBC1D7Q9P0N9 293 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 COL20A1Q9P218 1284 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 FAM184BQ9ULE4 1060 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 GJA3Q9Y6H8 435 aa11.74□□□□□ -0.53
DCAF11-227ENST00000560046 A0A0U1RQJ8 604 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 NFIBO00712 420 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 CETN3O15182 167 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 EIF3DO15371 548 aaKnown RBP eCLIP11.73□□□□□ -0.53
DCAF11-227ENST00000560046 KIF5CO60282 957 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 ZBED4O75132 1171 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 TADA3O75528 432 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 URI1O94763 535 aaPredicted RBP11.73□□□□□ -0.53
DCAF11-227ENST00000560046 UBE4BO95155 1302 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 LCTP09848 1927 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 ITGB5P18084 799 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 HOXD13P35453 343 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 CYLC1P35663 651 aaPredicted RBP11.73□□□□□ -0.53
DCAF11-227ENST00000560046 ZNF131P52739 623 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 UBXN2AP68543 259 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 CYP4A11Q02928 519 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 PPP2R3AQ06190 1150 aa11.73□□□□□ -0.53
DCAF11-227ENST00000560046 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
DCAF11-227ENST00000560046 NAA30Q147X3 362 aaPredicted RBP11.73□□□□□ -0.53
DCAF11-227ENST00000560046 KNOP1Q1ED39 458 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms