RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 GRIN1Q05586 938 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 SPIRE1Q08AE8 756 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 B3GNT9Q6UX72 402 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 TRMT1LQ7Z2T5 733 aaKnown RBP16.1■□□□□ 0.17
SMAD6-204ENST00000559931 IGSF22Q8N9C0 903 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 BANK1Q8NDB2 785 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 KLHDC9Q8NEP7 349 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 SNX29Q8TEQ0 813 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 DYDC2Q96IM9 177 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 AK8Q96MA6 479 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 SMARCAD1Q9H4L7 1026 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 RGL1Q9NZL6 768 aa16.1■□□□□ 0.17
SMAD6-204ENST00000559931 MORC2Q9Y6X9 1032 aaPredicted RBP16.1■□□□□ 0.17
SMAD6-204ENST00000559931 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 CTAGE5O15320 804 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 LGALS2P05162 132 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 P4HBP07237 508 aaKnown RBP16.09■□□□□ 0.17
SMAD6-204ENST00000559931 ASGR1P07306 291 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 TXLNAP40222 546 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 CTTNQ14247 550 aaKnown RBP16.09■□□□□ 0.17
SMAD6-204ENST00000559931 HAUS3Q68CZ6 603 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 PDXDC2PQ6P474 469 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 CXCL17Q6UXB2 119 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 MTG1Q9BT17 334 aaPredicted RBP16.09■□□□□ 0.17
SMAD6-204ENST00000559931 ZNF215Q9UL58 517 aaPredicted RBP16.09■□□□□ 0.17
SMAD6-204ENST00000559931 OGDHLQ9ULD0 1010 aa16.09■□□□□ 0.17
SMAD6-204ENST00000559931 KAT6AQ92794 2004 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 H3BRB1 525 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMAD6-204ENST00000559931 MARK3P27448 753 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 CST5P28325 142 aaPredicted RBP16.08■□□□□ 0.16
SMAD6-204ENST00000559931 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.16
SMAD6-204ENST00000559931 GJA8P48165 433 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 ACLYP53396 1101 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 PSMC5P62195 406 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 NKX3-2P78367 333 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 CABP7Q86V35 215 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 TRIM50Q86XT4 487 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 CCDC60Q8IWA6 550 aaPredicted RBP16.08■□□□□ 0.16
SMAD6-204ENST00000559931 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
SMAD6-204ENST00000559931 NEK9Q8TD19 979 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 CALML4Q96GE6 196 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 EPSTI1Q96J88 318 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 TSEN34Q9BSV6 310 aaKnown RBP16.08■□□□□ 0.16
SMAD6-204ENST00000559931 TUT1Q9H6E5 874 aaKnown RBP16.08■□□□□ 0.16
SMAD6-204ENST00000559931 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 CCDC39Q9UFE4 941 aa16.08■□□□□ 0.16
SMAD6-204ENST00000559931 DDX11L8A8MPP1 907 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 DNM1LO00429 736 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 PRPF40AO75400 957 aaKnown RBP16.07■□□□□ 0.16
SMAD6-204ENST00000559931 LGR5O75473 907 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 SLITRK3O94933 977 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 PURAQ00577 322 aaKnown RBP16.07■□□□□ 0.16
SMAD6-204ENST00000559931 AXDND1Q5T1B0 1012 aaPredicted RBP16.07■□□□□ 0.16
SMAD6-204ENST00000559931 ADALQ6DHV7 355 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 PLPPR4Q7Z2D5 763 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 SYMPKQ92797 1274 aaKnown RBP16.07■□□□□ 0.16
SMAD6-204ENST00000559931 PCYT2Q99447 389 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 PLIN2Q99541 437 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 HSD17B14Q9BPX1 270 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 LXNQ9BS40 222 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 C16orf70Q9BSU1 422 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
SMAD6-204ENST00000559931 PANK2Q9BZ23 570 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 CRISPLD2Q9H0B8 497 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 ZSWIM4Q9H7M6 989 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 TUFT1Q9NNX1 390 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 NRBP2Q9NSY0 501 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 ERAP1Q9NZ08 941 aa16.07■□□□□ 0.16
SMAD6-204ENST00000559931 EMSYQ7Z589 1322 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 IGKV6D-21A0A0A0MT36 114 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 MED24O75448 989 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 CABYRO75952 493 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 HOXD8P13378 290 aaPredicted RBP16.06■□□□□ 0.16
SMAD6-204ENST00000559931 RPA1P27694 616 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 PSEN2P49810 448 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 SLC26A2P50443 739 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 MFSD10Q14728 455 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 UGCGQ16739 394 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 CCSAPQ6IQ19 270 aaPredicted RBP16.06■□□□□ 0.16
SMAD6-204ENST00000559931 CLEC17AQ6ZS10 378 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 AFAP1L1Q8TED9 768 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 GLT1D1Q96MS3 346 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 KATNAL1Q9BW62 490 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 KIAA1024Q9UPX6 916 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 TRPC6Q9Y210 931 aa16.06■□□□□ 0.16
SMAD6-204ENST00000559931 MAFBQ9Y5Q3 323 aaPredicted RBP16.06■□□□□ 0.16
SMAD6-204ENST00000559931 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
SMAD6-204ENST00000559931 A0A087WWV3 80 aa16.05■□□□□ 0.16
SMAD6-204ENST00000559931 POTEB3A0JP26 581 aa16.05■□□□□ 0.16
SMAD6-204ENST00000559931 SPATA31C1P0DKV0 1188 aa16.05■□□□□ 0.16
SMAD6-204ENST00000559931 CAPN2P17655 700 aa16.05■□□□□ 0.16
SMAD6-204ENST00000559931 CMA1P23946 247 aa16.05■□□□□ 0.16
SMAD6-204ENST00000559931 PSMC6P62333 389 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms