RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ARID2Q68CP9 1835 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 A0A087WWV3 80 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 GSTTP1A0A1W2PQM5 241 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 ADCY6O43306 1168 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 ACTN4O43707 911 aaKnown RBP11.68□□□□□ -0.54
TPM1-221ENST00000559831 SLITRK3O94933 977 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 P4HBP07237 508 aaKnown RBP11.68□□□□□ -0.54
TPM1-221ENST00000559831 SPATA31C1P0DKV0 1188 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 HSPA1AP0DMV8 641 aaKnown RBP11.68□□□□□ -0.54
TPM1-221ENST00000559831 HSPA1BP0DMV9 641 aaKnown RBP11.68□□□□□ -0.54
TPM1-221ENST00000559831 AKR1A1P14550 325 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 LAMC2Q13753 1193 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 DHX8Q14562 1220 aaKnown RBP11.68□□□□□ -0.54
TPM1-221ENST00000559831 E2F4Q16254 413 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 UGCGQ16739 394 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 CCDC183Q5T5S1 534 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 UTP14CQ5TAP6 766 aaKnown RBP11.68□□□□□ -0.54
TPM1-221ENST00000559831 SWSAP1Q6NVH7 229 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 ABHD15Q6UXT9 468 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 KRBA2Q6ZNG9 492 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 SEPT1Q8WYJ6 367 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 NT5C3AQ9H0P0 336 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 TNMDQ9H2S6 317 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 CLSTN2Q9H4D0 955 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 ZNF302Q9NR11 478 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 TMEM63CQ9P1W3 806 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 USP25Q9UHP3 1055 aa11.68□□□□□ -0.54
TPM1-221ENST00000559831 KAT6AQ92794 2004 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 MYH11P35749 1972 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 E9PMD0 336 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 DYNC1LI2O43237 492 aaPredicted RBP11.67□□□□□ -0.54
TPM1-221ENST00000559831 INHAP05111 366 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 SSBP05455 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
TPM1-221ENST00000559831 CCND3P30281 292 aaPredicted RBP11.67□□□□□ -0.54
TPM1-221ENST00000559831 GRK4P32298 578 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 TCF7P36402 384 aaPredicted RBP11.67□□□□□ -0.54
TPM1-221ENST00000559831 AFMP43652 599 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
TPM1-221ENST00000559831 LBX1P52954 281 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 PSMC5P62195 406 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 MCM6Q14566 821 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 HSDL1Q3SXM5 330 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 NAALADL2Q58DX5 795 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 HYIQ5T013 277 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 FAM160B1Q5W0V3 765 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 PDXDC2PQ6P474 469 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 TRMT1LQ7Z2T5 733 aaKnown RBP11.67□□□□□ -0.54
TPM1-221ENST00000559831 KCNK18Q7Z418 384 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 TLK2Q86UE8 772 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 CCDC60Q8IWA6 550 aaPredicted RBP11.67□□□□□ -0.54
TPM1-221ENST00000559831 GRAMD1CQ8IYS0 662 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 AFG1LQ8WV93 481 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 RAD54LQ92698 747 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 STAMQ92783 540 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 CCDC34Q96HJ3 373 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 TIGD1Q96MW7 591 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 GPR20Q99678 358 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 HSD17B14Q9BPX1 270 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 AP5M1Q9H0R1 490 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 ZSWIM4Q9H7M6 989 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 WRAP73Q9P2S5 460 aaPredicted RBP11.67□□□□□ -0.54
TPM1-221ENST00000559831 STK17AQ9UEE5 414 aa11.67□□□□□ -0.54
TPM1-221ENST00000559831 DKC1O60832 514 aaKnown RBP eCLIP11.66□□□□□ -0.54
TPM1-221ENST00000559831 ATG7O95352 703 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 SLFN14P0C7P3 912 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 MUTP22033 750 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 CTCFP49711 727 aaPredicted RBP11.66□□□□□ -0.54
TPM1-221ENST00000559831 PSMC6P62333 389 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 CKAP2LQ8IYA6 745 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 PPTC7Q8NI37 304 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 PIGOQ8TEQ8 1089 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 LARP4BQ92615 738 aaKnown RBP11.66□□□□□ -0.54
TPM1-221ENST00000559831 ATP6V0A1Q93050 837 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 EMID1Q96A84 441 aaPredicted RBP11.66□□□□□ -0.54
TPM1-221ENST00000559831 PAGE5Q96GU1 130 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 NACC1Q96RE7 527 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 GZF1Q9H116 711 aaPredicted RBP11.66□□□□□ -0.54
TPM1-221ENST00000559831 CUEDC2Q9H467 287 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 AZI2Q9H6S1 392 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 BLOC1S4Q9NUP1 217 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 DNM3Q9UQ16 869 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 GNEQ9Y223 722 aaKnown RBP11.66□□□□□ -0.54
TPM1-221ENST00000559831 PTPN22Q9Y2R2 807 aa11.66□□□□□ -0.54
TPM1-221ENST00000559831 IGSF9BQ9UPX0 1349 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 ZBTB39O15060 712 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 SEPT4O43236 478 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 MMP3P08254 477 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 PLA2G4BP0C869 781 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 RARBP10826 455 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 STAT5BP51692 787 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 PRKCEQ02156 737 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 PNOCQ13519 176 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 KANK3Q6NY19 840 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 SV2BQ7L1I2 683 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms