RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 COPB1P53618 953 aaKnown RBP14.09□□□□□ -0.15
USP3-213ENST00000559711 KRT76Q01546 638 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 GLIS3Q8NEA6 775 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 RDM1Q8NG50 284 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 RBBP6Q7Z6E9 1792 aaKnown RBP14.08□□□□□ -0.15
USP3-213ENST00000559711 A0A0G2JMZ2 1700 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 SPATA31C2B4DYI2 1134 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 KIF20AO95235 890 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 KCNA2P16389 499 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
USP3-213ENST00000559711 RAD51AP2Q09MP3 1159 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 LRRC41Q15345 812 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 ZCWPW2Q504Y3 356 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 ZNF746Q6NUN9 644 aaPredicted RBP14.08□□□□□ -0.16
USP3-213ENST00000559711 FAM114A1Q8IWE2 563 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 BANK1Q8NDB2 785 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 RRAGCQ9HB90 399 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 COL4A3BPQ9Y5P4 624 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 COL11A1P12107 1806 aaPredicted RBP14.08□□□□□ -0.16
USP3-213ENST00000559711 ASTN1O14525 1302 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 NFASCO94856 1347 aa14.08□□□□□ -0.16
USP3-213ENST00000559711 WDR64B1ANS9 1081 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 N4BP3O15049 544 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 EIF3JO75822 258 aaKnown RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 FGFR1OPO95684 399 aaKnown RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 CCNE2O96020 404 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 GAP43P17677 238 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 SFPQP23246 707 aaKnown RBP eCLIP14.07□□□□□ -0.16
USP3-213ENST00000559711 EDNRBP24530 442 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 ICAM3P32942 547 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 QARSP47897 775 aaKnown RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 CCZ1BP86790 482 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 CCZ1P86791 482 aaPredicted RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 CNTN2Q02246 1040 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 STXBP2Q15833 593 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 GNPTABQ3T906 1256 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 EPM2AIP1Q7L775 607 aaPredicted RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 NCAPG2Q86XI2 1143 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 SCFD1Q8WVM8 642 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 MS4A4AQ96JQ5 239 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 PAGR1Q9BTK6 254 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 FGFBP2Q9BYJ0 223 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 ZNF408Q9H9D4 720 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 GBA2Q9HCG7 927 aaPredicted RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 TXNRD2Q9NNW7 524 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 SPTLC3Q9NUV7 552 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 MAGEC2Q9UBF1 373 aaPredicted RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 DBR1Q9UK59 544 aaKnown RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 SKILP12757 684 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 ERCC3P19447 782 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 GUCY2CP25092 1073 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 ALDH5A1P51649 535 aaPredicted RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 ZNF131P52739 623 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 NOLC1Q14978 699 aaKnown RBP eCLIP14.07□□□□□ -0.16
USP3-213ENST00000559711 PTPN21Q16825 1174 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 Q3C1V9 767 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 SFR1Q86XK3 245 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 C4orf19Q8IY42 314 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 FAM133AQ8N9E0 248 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 GTF3C2Q8WUA4 911 aaPredicted RBP14.07□□□□□ -0.16
USP3-213ENST00000559711 TSG101Q99816 390 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 VPS16Q9H269 839 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 OLFML3Q9NRN5 406 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 TAB2Q9NYJ8 693 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 TBC1D7Q9P0N9 293 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 TCEAL9Q9UHQ7 104 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 SLC45A1Q9Y2W3 748 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
USP3-213ENST00000559711 ITIH6Q6UXX5 1313 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 SOWAHBA6NEL2 793 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 TBCAO75347 108 aaKnown RBP14.06□□□□□ -0.16
USP3-213ENST00000559711 CETPP11597 493 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 GTF2A2P52657 109 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 PSMC5P62195 406 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 LRRC55Q6ZSA7 311 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 SMAP1Q8IYB5 467 aaPredicted RBP14.06□□□□□ -0.16
USP3-213ENST00000559711 ZNF507Q8TCN5 953 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 KCTD10Q9H3F6 313 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 TMX1Q9H3N1 280 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 ZHX3Q9H4I2 956 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 PNMA3Q9UL41 463 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 ODF2LQ9ULJ1 636 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 PCDHA10Q9Y5I2 948 aa14.06□□□□□ -0.16
USP3-213ENST00000559711 ARHGEF35A5YM69 484 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 LGALS16A8MUM7 142 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 RSPH10B2B2RC85 870 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 RSPH10BP0C881 870 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 FKBP3Q00688 224 aaKnown RBP14.05□□□□□ -0.16
USP3-213ENST00000559711 BMT2Q1RMZ1 405 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 ZC3H3Q8IXZ2 948 aaKnown RBP14.05□□□□□ -0.16
USP3-213ENST00000559711 C2orf69Q8N8R5 385 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 SHCBP1Q8NEM2 672 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 CNOT6LQ96LI5 555 aaKnown RBP14.05□□□□□ -0.16
USP3-213ENST00000559711 TUBGCP2Q9BSJ2 902 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 R3HDMLQ9H3Y0 253 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 MROH8Q9H579 483 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 SEL1LQ9UBV2 794 aa14.05□□□□□ -0.16
USP3-213ENST00000559711 A0A1W2PQC6 194 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 FAM13AO94988 1023 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms