RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 CCDC60Q8IWA6 550 aaPredicted RBP19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 FAM200AQ8TCP9 573 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 USP6NLQ92738 828 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 DDX12PQ92771 950 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 DDX41Q9UJV9 622 aaKnown RBP19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 SYNGAP1Q96PV0 1343 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 XRCC6P12956 609 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 MAP2K5Q13163 448 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 TAPT1Q6NXT6 567 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 CCDC62Q6P9F0 684 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 DHX40Q8IX18 779 aaKnown RBP19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 DNAJC19Q96DA6 116 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 CCDC34Q96HJ3 373 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 GSDMAQ96QA5 445 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 TNPO2O14787 897 aaKnown RBP19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 ADCY6O43306 1168 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 SLC26A4O43511 780 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 ZNF862O60290 1169 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 P4HBP07237 508 aaKnown RBP19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 CYP2B6P20813 491 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 JAK3P52333 1124 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 IQCB1Q15051 598 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 MAMDC4Q6UXC1 1216 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 TRIM47Q96LD4 638 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 MED15Q96RN5 788 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 SENP7Q9BQF6 1050 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 GJD2Q9UKL4 321 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 DNM3Q9UQ16 869 aa19.34■□□□□ 0.69
CHRNA3-206ENST00000559658 EYA4O95677 639 aa19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 ABHD15Q6UXT9 468 aa19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 ZNF467Q7Z7K2 595 aaPredicted RBP19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 AOPEPQ8N6M6 819 aa19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 MPHOSPH6Q99547 160 aaKnown RBP19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 TINF2Q9BSI4 451 aa19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 GABBR1Q9UBS5 961 aa19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 MAPK8IP1Q9UQF2 711 aa19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 PCDHA10Q9Y5I2 948 aa19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 LOXHD1Q8IVV2 1947 aa19.33■□□□□ 0.69
CHRNA3-206ENST00000559658 MYH9P35579 1960 aaKnown RBP19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 BRCA2P51587 3418 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 B4DLN1 442 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 TRPA1O75762 1119 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 SFNP31947 248 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 ADCYAP1R1P41586 468 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 QARSP47897 775 aaKnown RBP19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 LACTBP83111 547 aaPredicted RBP19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 HSDL1Q3SXM5 330 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 PRAMEF19Q5SWL8 479 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 UTP14CQ5TAP6 766 aaKnown RBP19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 PLA2G4FQ68DD2 849 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 TRMT44Q8IYL2 757 aaKnown RBP19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 SYT2Q8N9I0 419 aaPredicted RBP19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 GLIS3Q8NEA6 775 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 FGFBP2Q9BYJ0 223 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 TCEAL9Q9UHQ7 104 aa19.33■□□□□ 0.68
CHRNA3-206ENST00000559658 GSTTP1A0A1W2PQM5 241 aa19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 RSPH10B2B2RC85 870 aa19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 RSPH10BP0C881 870 aa19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 TXNP10599 105 aaKnown RBP19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 SWSAP1Q6NVH7 229 aa19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 NEK9Q8TD19 979 aa19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 PCYT2Q99447 389 aa19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 BMP2KQ9NSY1 1161 aaPredicted RBP19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 GABRQQ9UN88 632 aa19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 DIS3Q9Y2L1 958 aaKnown RBP19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 STK24Q9Y6E0 443 aa19.32■□□□□ 0.68
CHRNA3-206ENST00000559658 LOC102724159A0A0B4J2E5 919 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 AP5Z1O43299 807 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 ALDH1A1P00352 501 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 SUPT20HL2P0C7V6 817 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 IDEP14735 1019 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 PSMC4P43686 418 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 MRE11P49959 708 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 PWP2Q15269 919 aaKnown RBP19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 METTL7BQ6UX53 244 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 SMAP1Q8IYB5 467 aaPredicted RBP19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 TRIML1Q8N9V2 468 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 REEP2Q9BRK0 252 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 ZSWIM4Q9H7M6 989 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 RNF186Q9NXI6 227 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 PPP1R3GB7ZBB8 358 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 RHOBTB3O94955 611 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 STBD1O95210 358 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 MYL1P05976 194 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 CYP2C19P33261 490 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 PSMC5P62195 406 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 AMPD3Q01432 767 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 STK4Q13043 487 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 CELF3Q5SZQ8 465 aaKnown RBP19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 RINT1Q6NUQ1 792 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 TRIM50Q86XT4 487 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 KIAA0895Q8NCT3 520 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 LENG1Q96BZ8 264 aaPredicted RBP19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 VTA1Q9NP79 307 aa19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 ZHX1Q9UKY1 873 aaPredicted RBP19.31■□□□□ 0.68
CHRNA3-206ENST00000559658 IGSF9BQ9UPX0 1349 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 BACH1O14867 736 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 HOXC6P09630 235 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 TGFB3P10600 412 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms