RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
LRRC28-213ENST00000559399 NFASCO94856 1347 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 SREBF1P36956 1147 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 ACTR2P61160 394 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 IGBP1P78318 339 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 LPIN1Q14693 890 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 MARCH8Q5T0T0 291 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 DNAJB3Q8WWF6 145 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 AGO4Q9HCK5 861 aaKnown RBP17.05■□□□□ 0.32
LRRC28-213ENST00000559399 FAM217BQ9NTX9 383 aaPredicted RBP17.05■□□□□ 0.32
LRRC28-213ENST00000559399 TMEM260Q9NX78 707 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 TRPC6Q9Y210 931 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 TRANK1O15050 2925 aa17.05■□□□□ 0.32
LRRC28-213ENST00000559399 CCDC196A0A1B0GTZ2 297 aa17.04■□□□□ 0.32
LRRC28-213ENST00000559399 ARP10275 920 aa17.04■□□□□ 0.32
LRRC28-213ENST00000559399 INSRRP14616 1297 aa17.04■□□□□ 0.32
LRRC28-213ENST00000559399 CDC27P30260 824 aa17.04■□□□□ 0.32
LRRC28-213ENST00000559399 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
LRRC28-213ENST00000559399 ITGB3BPQ13352 177 aaPredicted RBP17.04■□□□□ 0.32
LRRC28-213ENST00000559399 PTPROQ16827 1216 aa17.04■□□□□ 0.32
LRRC28-213ENST00000559399 CDY2AQ9Y6F7 541 aa17.04■□□□□ 0.32
LRRC28-213ENST00000559399 MEIS1O00470 390 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 ZNF76P36508 570 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 CLK2P49760 499 aaKnown RBP17.03■□□□□ 0.32
LRRC28-213ENST00000559399 MRPS6P82932 125 aaKnown RBP17.03■□□□□ 0.32
LRRC28-213ENST00000559399 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-213ENST00000559399 FBXO47Q5MNV8 452 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 IER5Q5VY09 327 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 TSHZ1Q6ZSZ6 1077 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 PLPPR4Q7Z2D5 763 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 ZBTB10Q96DT7 871 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 MRPL38Q96DV4 380 aaKnown RBP17.03■□□□□ 0.32
LRRC28-213ENST00000559399 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 JAKMIP1Q96N16 626 aaKnown RBP17.03■□□□□ 0.32
LRRC28-213ENST00000559399 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-213ENST00000559399 COL4A4P53420 1690 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-213ENST00000559399 COL4A6Q14031 1691 aa17.03■□□□□ 0.32
LRRC28-213ENST00000559399 SCG2P13521 617 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 CPA1P15085 419 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 ADD1P35611 737 aaKnown RBP17.02■□□□□ 0.32
LRRC28-213ENST00000559399 SLC26A2P50443 739 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 STAT5BP51692 787 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 PLCB4Q15147 1175 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 TIGD5Q53EQ6 642 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 BLOC1S2Q6QNY1 142 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 Q6ZUG5 572 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 NIPA1Q7RTP0 329 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 TMEM192Q8IY95 271 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 KCNB2Q92953 911 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 BRF1Q92994 677 aa17.02■□□□□ 0.32
LRRC28-213ENST00000559399 UBE2ZQ9H832 354 aaPredicted RBP17.02■□□□□ 0.32
LRRC28-213ENST00000559399 PTPRSQ13332 1948 aa17.02■□□□□ 0.31
LRRC28-213ENST00000559399 REV3LO60673 3130 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 TRIP12Q14669 1992 aaPredicted RBP17.01■□□□□ 0.31
LRRC28-213ENST00000559399 ESYT2A0FGR8 921 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 H3BNC9 293 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 M0QZ92 97 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 HSPA4P34932 840 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 APOBRQ0VD83 1088 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 GPM6BQ13491 265 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 JAKMIP3Q5VZ66 844 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 CCDC12Q8WUD4 166 aaPredicted RBP17.01■□□□□ 0.31
LRRC28-213ENST00000559399 PCDHA2Q9Y5H9 948 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 TRPV2Q9Y5S1 764 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 PRRC2BQ5JSZ5 2229 aaKnown RBP17.01■□□□□ 0.31
LRRC28-213ENST00000559399 NID2Q14112 1375 aa17.01■□□□□ 0.31
LRRC28-213ENST00000559399 ADGRA3Q8IWK6 1321 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 POTEB3A0JP26 581 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 FAM86B1E9PN63 330 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
LRRC28-213ENST00000559399 BACH1O14867 736 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 ATG7O95352 703 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 CCNE2O96020 404 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 FAM86B2P0C5J1 330 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 CD52P31358 61 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 MCTP2Q6DN12 878 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 POTEBQ6S5H4 581 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 PLA2G4DQ86XP0 818 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 FIBCD1Q8N539 461 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 TRAPPC12Q8WVT3 735 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 ZMYND12Q9H0C1 365 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 AGO3Q9H9G7 860 aaKnown RBP17■□□□□ 0.31
LRRC28-213ENST00000559399 C6orf50Q9HD87 102 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 SNX14Q9Y5W7 946 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 SQORQ9Y6N5 450 aa17■□□□□ 0.31
LRRC28-213ENST00000559399 IGKV6D-21A0A0A0MT36 114 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 SMIM35A0A1B0GVV1 85 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 ENPP3O14638 875 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 KCNA5P22460 613 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 CTNNB1P35222 781 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
LRRC28-213ENST00000559399 TMEM62Q0P6H9 643 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 FAM160B1Q5W0V3 765 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 REXO1Q8N1G1 1221 aaKnown RBP16.99■□□□□ 0.31
LRRC28-213ENST00000559399 FBXL16Q8N461 479 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 BANK1Q8NDB2 785 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 CRYGNQ8WXF5 182 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 CCDC136Q96JN2 1154 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms