RNA–Protein interactions for RNA: ENST00000558926.1

AP3S2-207, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-207ENST00000558926 TAP1Q03518 808 aa12.88□□□□□ -0.35
AP3S2-207ENST00000558926 ITGB3BPQ13352 177 aaPredicted RBP12.88□□□□□ -0.35
AP3S2-207ENST00000558926 TOB2Q14106 344 aaPredicted RBP12.88□□□□□ -0.35
AP3S2-207ENST00000558926 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
AP3S2-207ENST00000558926 GRIK4Q16099 956 aa12.88□□□□□ -0.35
AP3S2-207ENST00000558926 KRT40Q6A162 431 aa12.88□□□□□ -0.35
AP3S2-207ENST00000558926 REXO1Q8N1G1 1221 aaKnown RBP12.88□□□□□ -0.35
AP3S2-207ENST00000558926 CCDC12Q8WUD4 166 aaPredicted RBP12.88□□□□□ -0.35
AP3S2-207ENST00000558926 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
AP3S2-207ENST00000558926 DNAJB3Q8WWF6 145 aa12.88□□□□□ -0.35
AP3S2-207ENST00000558926 SEPT8Q92599 483 aa12.88□□□□□ -0.35
AP3S2-207ENST00000558926 FAM49AQ9H0Q0 323 aaPredicted RBP12.88□□□□□ -0.35
AP3S2-207ENST00000558926 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
AP3S2-207ENST00000558926 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
AP3S2-207ENST00000558926 FAM86B1E9PN63 330 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 MEIS1O00470 390 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 CPLX1O14810 134 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 AMHP03971 560 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 FAM86B2P0C5J1 330 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 GHRP10912 638 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 INSRRP14616 1297 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 HOXC8P31273 242 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 STAT5BP51692 787 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 TMEM62Q0P6H9 643 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 PCYT2Q99447 389 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
AP3S2-207ENST00000558926 PDRG1Q9NUG6 133 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 SIP14410 1827 aa12.87□□□□□ -0.35
AP3S2-207ENST00000558926 EFCAB14O75071 495 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 GJB5O95377 273 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 CHRNA1P02708 482 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 IFNAR1P17181 557 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 IBSPP21815 317 aaPredicted RBP12.86□□□□□ -0.35
AP3S2-207ENST00000558926 GNA11P29992 359 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 NLRP5P59047 1200 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 ADAM17P78536 824 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
AP3S2-207ENST00000558926 NTRK3Q16288 839 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 PRR16Q569H4 304 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 PLEKHG4Q58EX7 1191 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 RAD9AQ99638 391 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 ZNF577Q9BSK1 485 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 RNF26Q9BY78 433 aaPredicted RBP12.86□□□□□ -0.35
AP3S2-207ENST00000558926 AGXT2Q9BYV1 514 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 TCEAL9Q9UHQ7 104 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 WDR81Q562E7 1941 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 NFASCO94856 1347 aa12.86□□□□□ -0.35
AP3S2-207ENST00000558926 TCF20Q9UGU0 1960 aaKnown RBP12.85□□□□□ -0.35
AP3S2-207ENST00000558926 IPO5O00410 1097 aaKnown RBP12.85□□□□□ -0.35
AP3S2-207ENST00000558926 GTPBP6O43824 516 aaPredicted RBP12.85□□□□□ -0.35
AP3S2-207ENST00000558926 CCNE2O96020 404 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 PLCB4Q15147 1175 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 MARCH8Q5T0T0 291 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 SWSAP1Q6NVH7 229 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 CKAP2LQ8IYA6 745 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 CCDC148Q8NFR7 591 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 GDPD5Q8WTR4 605 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 IFIH1Q9BYX4 1025 aaKnown RBP12.85□□□□□ -0.35
AP3S2-207ENST00000558926 SAMM50Q9Y512 469 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 CDY2AQ9Y6F7 541 aa12.85□□□□□ -0.35
AP3S2-207ENST00000558926 COL4A4P53420 1690 aaPredicted RBP12.85□□□□□ -0.35
AP3S2-207ENST00000558926 NID2Q14112 1375 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 ESYT2A0FGR8 921 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 POTEB3A0JP26 581 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 RRN3P2A6NIE6 340 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 CAND2O75155 1236 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 FAM160B1Q5W0V3 765 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 TAF2Q6P1X5 1199 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 POTEBQ6S5H4 581 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 NIPA1Q7RTP0 329 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 FBXL16Q8N461 479 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 AIFM3Q96NN9 605 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 YME1L1Q96TA2 773 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 GINS2Q9Y248 185 aa12.84□□□□□ -0.35
AP3S2-207ENST00000558926 XIRP2A4UGR9 3374 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 IGLV3-22A0A075B6J6 115 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 LINC01553A4QN01 128 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 CYP3A4P08684 503 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 EVCP57679 992 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 MRPS6P82932 125 aaKnown RBP12.83□□□□□ -0.36
AP3S2-207ENST00000558926 GRB10Q13322 594 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 LPIN1Q14693 890 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 FAM26DQ5JW98 314 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 MCTP2Q6DN12 878 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 MIS18BP1Q6P0N0 1132 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 CPLX2Q6PUV4 134 aaKnown RBP12.83□□□□□ -0.36
AP3S2-207ENST00000558926 ABHD15Q6UXT9 468 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 PLPPR4Q7Z2D5 763 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 CCDC60Q8IWA6 550 aaPredicted RBP12.83□□□□□ -0.36
AP3S2-207ENST00000558926 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 TNPO1Q92973 898 aaKnown RBP12.83□□□□□ -0.36
AP3S2-207ENST00000558926 GJA10Q969M2 543 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 ZNF274Q96GC6 653 aaPredicted RBP12.83□□□□□ -0.36
AP3S2-207ENST00000558926 PPP1R16BQ96T49 567 aa12.83□□□□□ -0.36
AP3S2-207ENST00000558926 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms