RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SCRN1Q12765 414 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 XRRA1Q6P2D8 792 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 CPLX2Q6PUV4 134 aaKnown RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 REXO1Q8N1G1 1221 aaKnown RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 ZNF713Q8N859 430 aaPredicted RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 CCDC12Q8WUD4 166 aaPredicted RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 GLG1Q92896 1179 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 WNT8BQ93098 351 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 GPRASP2Q96D09 838 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 RNF26Q9BY78 433 aaPredicted RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 TUT1Q9H6E5 874 aaKnown RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 SETD4Q9NVD3 440 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 CXXC1Q9P0U4 656 aaPredicted RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 GTF2IRD1Q9UHL9 959 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 KCNJ14Q9UNX9 436 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 C17orf102A2RUQ5 167 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 LARGE1O95461 756 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 FOSP01100 380 aaPredicted RBP13.68□□□□□ -0.22
TPM1-216ENST00000558910 CTSHP09668 335 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 PRSS12P56730 875 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 LAPTM4BQ86VI4 370 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 PLA2G4DQ86XP0 818 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 DHX38Q92620 1227 aaKnown RBP13.68□□□□□ -0.22
TPM1-216ENST00000558910 ATP6V0A1Q93050 837 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 ZBTB10Q96DT7 871 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 ZNF274Q96GC6 653 aaPredicted RBP13.68□□□□□ -0.22
TPM1-216ENST00000558910 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 KCNH7Q9NS40 1196 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 GJB4Q9NTQ9 266 aa13.68□□□□□ -0.22
TPM1-216ENST00000558910 SCN10AQ9Y5Y9 1956 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 GSTTP1A0A1W2PQM5 241 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 TREHO43280 583 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 GNA11P29992 359 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 SREBF1P36956 1147 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 THPOP40225 353 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 CLK2P49760 499 aaKnown RBP13.67□□□□□ -0.22
TPM1-216ENST00000558910 RABGGTBP53611 331 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 PTPN11Q06124 597 aaPredicted RBP13.67□□□□□ -0.22
TPM1-216ENST00000558910 AP3B2Q13367 1082 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 BFSP2Q13515 415 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 CEP55Q53EZ4 464 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 PSRC1Q6PGN9 363 aaPredicted RBP13.67□□□□□ -0.22
TPM1-216ENST00000558910 FBXL16Q8N461 479 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 CCDC148Q8NFR7 591 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 SEZ6LQ9BYH1 1024 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 ZMYND12Q9H0C1 365 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 RNPEPQ9H4A4 650 aa13.67□□□□□ -0.22
TPM1-216ENST00000558910 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
TPM1-216ENST00000558910 FAM86B1E9PN63 330 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 HAS3O00219 553 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 DEXIO95424 95 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 FAM86B2P0C5J1 330 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 IQCF3P0C7M6 154 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 EVCP57679 992 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 ITGB3BPQ13352 177 aaPredicted RBP13.66□□□□□ -0.22
TPM1-216ENST00000558910 PRR16Q569H4 304 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 ZNF697Q5TEC3 545 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 RPUSD2Q8IZ73 545 aaKnown RBP13.66□□□□□ -0.22
TPM1-216ENST00000558910 CCDC155Q8N6L0 562 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 GIMAP8Q8ND71 665 aaPredicted RBP13.66□□□□□ -0.22
TPM1-216ENST00000558910 SEPT1Q8WYJ6 367 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 GJA10Q969M2 543 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 ZFRQ96KR1 1074 aaKnown RBP13.66□□□□□ -0.22
TPM1-216ENST00000558910 CTAGE1Q96RT6 745 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 AGO4Q9HCK5 861 aaKnown RBP13.66□□□□□ -0.22
TPM1-216ENST00000558910 JPH1Q9HDC5 661 aaPredicted RBP13.66□□□□□ -0.22
TPM1-216ENST00000558910 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 NID2Q14112 1375 aa13.66□□□□□ -0.22
TPM1-216ENST00000558910 C3orf80F5H4A9 247 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 DLL1O00548 723 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 BACH1O14867 736 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 CHMP2AO43633 222 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 PFKFB2O60825 505 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 CKBP12277 381 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 ANAPC15P60006 121 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 ACTR2P61160 394 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 ME3Q16798 604 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 LRRC8DQ7L1W4 858 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 TMCO2Q7Z6W1 182 aaPredicted RBP13.65□□□□□ -0.22
TPM1-216ENST00000558910 PACS2Q86VP3 889 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 ANKK1Q8NFD2 765 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 ZNF577Q9BSK1 485 aa13.65□□□□□ -0.22
TPM1-216ENST00000558910 NPDC1Q9NQX5 325 aaPredicted RBP13.65□□□□□ -0.22
TPM1-216ENST00000558910 ORC3Q9UBD5 711 aaPredicted RBP13.65□□□□□ -0.22
TPM1-216ENST00000558910 SCN5AQ14524 2016 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.64□□□□□ -0.23
TPM1-216ENST00000558910 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.64□□□□□ -0.23
TPM1-216ENST00000558910 ESYT2A0FGR8 921 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 SMAPO00193 183 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 JAK2O60674 1132 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 CDKL5O76039 1030 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 HOXD8P13378 290 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms