RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 ARNTL2Q8WYA1 636 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 SEPT1Q8WYJ6 367 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 CUL5Q93034 780 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 TOP1MTQ969P6 601 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 RAD9AQ99638 391 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 MXRA8Q9BRK3 442 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 RBM28Q9NW13 759 aaKnown RBP6.36□□□□□ -1.39
SMAD3-209ENST00000558894 BARHL2Q9NY43 387 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 THEGQ9P2T0 379 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 ARID2Q68CP9 1835 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 ZFHX4Q86UP3 3567 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 SMCO2A6NFE2 343 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 ZBTB42B2RXF5 422 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 hCG_1984214I3L0E3 225 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 NOP56O00567 594 aaKnown RBP6.35□□□□□ -1.39
SMAD3-209ENST00000558894 EFCAB14O75071 495 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 CTSHP09668 335 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 INSRRP14616 1297 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 ATP4AP20648 1035 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 SREBF1P36956 1147 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 KCNJ6P48051 423 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 KCNQ1P51787 676 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 ARHGAP4P98171 946 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 SP4Q02446 784 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 APOBRQ0VD83 1088 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 LPIN1Q14693 890 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 PLCB4Q15147 1175 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 RTN1Q16799 776 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 PFKFB3Q16875 520 aaPredicted RBP6.35□□□□□ -1.39
SMAD3-209ENST00000558894 CEP55Q53EZ4 464 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 RNF20Q5VTR2 975 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 FAM117BQ6P1L5 589 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 Q6ZUG5 572 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 RTN4RL1Q86UN2 441 aaPredicted RBP6.35□□□□□ -1.39
SMAD3-209ENST00000558894 ZNF713Q8N859 430 aaPredicted RBP6.35□□□□□ -1.39
SMAD3-209ENST00000558894 GDPD5Q8WTR4 605 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 LINC01599Q8WXQ3 324 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 SYMPKQ92797 1274 aaKnown RBP6.35□□□□□ -1.39
SMAD3-209ENST00000558894 LENG9Q96B70 501 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 CDHR1Q96JP9 859 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 C17orf80Q9BSJ5 609 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 ANO3Q9BYT9 981 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 ZMYND12Q9H0C1 365 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 AGO3Q9H9G7 860 aaKnown RBP6.35□□□□□ -1.39
SMAD3-209ENST00000558894 AGO4Q9HCK5 861 aaKnown RBP6.35□□□□□ -1.39
SMAD3-209ENST00000558894 ERAP1Q9NZ08 941 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 PKD2L1Q9P0L9 805 aa6.35□□□□□ -1.39
SMAD3-209ENST00000558894 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 ESYT2A0FGR8 921 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 SPDYE3A6NKU9 549 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 GOLGA8AA7E2F4 631 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 GOLGA8BA8MQT2 603 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 KIF28PB7ZC32 967 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 TNFRSF10AO00220 468 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 ENPP3O14638 875 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 PRPF3O43395 683 aaKnown RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 FOSP01100 380 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 AMHP03971 560 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 CYP3A4P08684 503 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 HMGB1P09429 215 aaKnown RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 SCG2P13521 617 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 RPS6KB1P23443 525 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 MARK3P27448 753 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 ADCY7P51828 1080 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 NAPAP54920 295 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 ACTR2P61160 394 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 MRPS5P82675 430 aaKnown RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 PPFIA1Q13136 1202 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 AP3B2Q13367 1082 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 TOB2Q14106 344 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 KRT32Q14532 448 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 COL19A1Q14993 1142 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 GRIK4Q16099 956 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 FBXO47Q5MNV8 452 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 ABHD15Q6UXT9 468 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 NIPA1Q7RTP0 329 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 PLPPR4Q7Z2D5 763 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 ADAMTS19Q8TE59 1207 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 TRAPPC12Q8WVT3 735 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 DNAJB3Q8WWF6 145 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 SEPT8Q92599 483 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 BRF1Q92994 677 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 ZNF689Q96CS4 500 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 JAKMIP1Q96N16 626 aaKnown RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 NECAB3Q96P71 396 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 TGS1Q96RS0 853 aaKnown RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 SMARCAD1Q9H4L7 1026 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 JPH1Q9HDC5 661 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 LMCD1Q9NZU5 365 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 SLC9A2Q9UBY0 812 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 TUBE1Q9UJT0 475 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 ZNF215Q9UL58 517 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-209ENST00000558894 MTUS1Q9ULD2 1270 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 INSL6Q9Y581 213 aa6.34□□□□□ -1.39
SMAD3-209ENST00000558894 CACNA1GO43497 2377 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 H3BNC9 293 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 M0R2N6 131 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 GHRP10912 638 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 GNAT1P11488 350 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 PDIA3P30101 505 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms