RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 GNA11P29992 359 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 HOXC8P31273 242 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 FOSBP53539 338 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 RBL2Q08999 1139 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 TMEM62Q0P6H9 643 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 SCRN1Q12765 414 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 DNAJB3Q8WWF6 145 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 SLC9A7Q96T83 725 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 SLKQ9H2G2 1235 aaPredicted RBP14.24□□□□□ -0.13
SMAD3-208ENST00000558827 AZI2Q9H6S1 392 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 PRDM6Q9NQX0 595 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 ERAP1Q9NZ08 941 aa14.24□□□□□ -0.13
SMAD3-208ENST00000558827 PTPRSQ13332 1948 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 NFASCO94856 1347 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 IGLV3-22A0A075B6J6 115 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 EDIL3O43854 480 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 TLL1O43897 1013 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 CYP3A4P08684 503 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 STAT5BP51692 787 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 AK2P54819 239 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 ADAM17P78536 824 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 IKBKEQ14164 716 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 PLCB4Q15147 1175 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 MARCH8Q5T0T0 291 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 CCDC148Q8NFR7 591 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 ARNTL2Q8WYA1 636 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 GAS2L1Q99501 681 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-208ENST00000558827 ZNF577Q9BSK1 485 aa14.23□□□□□ -0.13
SMAD3-208ENST00000558827 CDH23Q9H251 3354 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 NRCAMQ92823 1304 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 A0A0C4DFX4 3053 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 EPOPA6NHQ4 379 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 KIF28PB7ZC32 967 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 IPO5O00410 1097 aaKnown RBP14.22□□□□□ -0.13
SMAD3-208ENST00000558827 DHX15O43143 795 aaKnown RBP14.22□□□□□ -0.13
SMAD3-208ENST00000558827 BAIAP3O94812 1187 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 UPP2O95045 317 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 DEXIO95424 95 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 LARGE1O95461 756 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 CHRNA1P02708 482 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 GHRP10912 638 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 IBSPP21815 317 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-208ENST00000558827 KRT40Q6A162 431 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 SWSAP1Q6NVH7 229 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 CPLX2Q6PUV4 134 aaKnown RBP14.22□□□□□ -0.13
SMAD3-208ENST00000558827 MYOCDQ8IZQ8 938 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 BICD2Q8TD16 824 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 CRYGNQ8WXF5 182 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 TUBE1Q9UJT0 475 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 MTUS1Q9ULD2 1270 aa14.22□□□□□ -0.13
SMAD3-208ENST00000558827 ABHD14A-ACY1A0A1B0GW23 586 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 POTEB3A0JP26 581 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 TAP1Q03518 808 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 POTEBQ6S5H4 581 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 ABHD15Q6UXT9 468 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 NIPA1Q7RTP0 329 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 CCDC60Q8IWA6 550 aaPredicted RBP14.21□□□□□ -0.13
SMAD3-208ENST00000558827 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMAD3-208ENST00000558827 BLIDQ8IZY5 108 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 PHOSPHO2Q8TCD6 241 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 TBCKQ8TEA7 893 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 SEPT8Q92599 483 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 PPP1R16BQ96T49 567 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 PCDHA4Q9UN74 947 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 CDY2AQ9Y6F7 541 aa14.21□□□□□ -0.13
SMAD3-208ENST00000558827 EMSYQ7Z589 1322 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 CHD7Q9P2D1 2997 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 CHMP2AO43633 222 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 PFKFB2O60825 505 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 PARNO95453 639 aaKnown RBP14.2□□□□□ -0.14
SMAD3-208ENST00000558827 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 TDP2O95551 362 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 ATP4AP20648 1035 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 NEK4P51957 841 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 PLEKHG4Q58EX7 1191 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 PDXDC2PQ6P474 469 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 CKAP2LQ8IYA6 745 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 ZNF302Q9NR11 478 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 SH3GLB2Q9NR46 395 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 TCEAL9Q9UHQ7 104 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 SAMM50Q9Y512 469 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 PRRC2BQ5JSZ5 2229 aaKnown RBP14.2□□□□□ -0.14
SMAD3-208ENST00000558827 PRUNE2Q8WUY3 3088 aa14.2□□□□□ -0.14
SMAD3-208ENST00000558827 EVPLQ92817 2033 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 DLL1O00548 723 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 MSH4O15457 936 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 ATG7O95352 703 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 KLRC1P26715 233 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 LPIN1Q14693 890 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 NPY5RQ15761 445 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 ME3Q16798 604 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 INF2Q27J81 1249 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 FAM160B1Q5W0V3 765 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 MIS18BP1Q6P0N0 1132 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 PLPPR4Q7Z2D5 763 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 OXER1Q8TDS5 423 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 LENG9Q96B70 501 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 ORC3Q9UBD5 711 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms