RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 RABEP1Q15276 862 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 GRIK4Q16099 956 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 ZNF618Q5T7W0 954 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 PIK3AP1Q6ZUJ8 805 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 CCDC60Q8IWA6 550 aaPredicted RBP12.48□□□□□ -0.41
PBX1-213ENST00000558796 HERVK_113Q902F9 699 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.41
PBX1-213ENST00000558796 TCEAL9Q9UHQ7 104 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 EYSQ5T1H1 3165 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 NLRC5Q86WI3 1866 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 NRCAMQ92823 1304 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 GRXCR1A8MXD5 290 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 CHMP2AO43633 222 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 NBNO60934 754 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 PFKMP08237 780 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 GNAT1P11488 350 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 KRT2P35908 639 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 STAT5BP51692 787 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 IGBP1P78318 339 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 SMAD3P84022 425 aaKnown RBP12.47□□□□□ -0.41
PBX1-213ENST00000558796 NR5A1Q13285 461 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 PLCB4Q15147 1175 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 LETM2Q2VYF4 491 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 RASIP1Q5U651 963 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 MIS18BP1Q6P0N0 1132 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 RUFY4Q6ZNE9 571 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 DEFB123Q8N688 67 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 TRAPPC12Q8WVT3 735 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 ZBTB10Q96DT7 871 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 TBC1D32Q96NH3 1257 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 MTIF3Q9H2K0 278 aaKnown RBP12.47□□□□□ -0.41
PBX1-213ENST00000558796 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 TBC1D22BQ9NU19 505 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 TUBE1Q9UJT0 475 aa12.47□□□□□ -0.41
PBX1-213ENST00000558796 SLC37A4O43826 429 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 GAS7O60861 476 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 ATG7O95352 703 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 ADAM17P78536 824 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 KRT76Q01546 638 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 TRIM29Q14134 588 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 MBTPS1Q14703 1052 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 GPNMBQ14956 572 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 Q4G0T1 1027 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 EARS2Q5JPH6 523 aaKnown RBP12.46□□□□□ -0.41
PBX1-213ENST00000558796 LRCH2Q5VUJ6 765 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 FAM160B1Q5W0V3 765 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 KRT40Q6A162 431 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 ZNF746Q6NUN9 644 aaPredicted RBP12.46□□□□□ -0.41
PBX1-213ENST00000558796 ABHD15Q6UXT9 468 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 PLPPR4Q7Z2D5 763 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 NEK8Q86SG6 692 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 SLC5A5Q92911 643 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.41
PBX1-213ENST00000558796 FAM161BQ96MY7 647 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 ZNF302Q9NR11 478 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 SH2B1Q9NRF2 756 aaPredicted RBP12.46□□□□□ -0.41
PBX1-213ENST00000558796 DDX25Q9UHL0 483 aaKnown RBP12.46□□□□□ -0.41
PBX1-213ENST00000558796 SAMM50Q9Y512 469 aa12.46□□□□□ -0.41
PBX1-213ENST00000558796 TRANK1O15050 2925 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 COL4A4P53420 1690 aaPredicted RBP12.45□□□□□ -0.42
PBX1-213ENST00000558796 CYP3A7-CYP3A51PA0A087WV96 503 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 IGKV6D-21A0A0A0MT36 114 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
PBX1-213ENST00000558796 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
PBX1-213ENST00000558796 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 RSPH10B2B2RC85 870 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 ST18O60284 1047 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 CD2BP2O95400 341 aaKnown RBP12.45□□□□□ -0.42
PBX1-213ENST00000558796 MMP1P03956 469 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 PSAPP07602 524 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 RSPH10BP0C881 870 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 ACTN1P12814 892 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 INSRRP14616 1297 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 CYP3A7P24462 503 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 DNAJB2P25686 324 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 PBX2P40425 430 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 TCTN1Q2MV58 587 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 MARCH8Q5T0T0 291 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 ZNF697Q5TEC3 545 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 GPR153Q6NV75 609 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 PDXDC2PQ6P474 469 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 MOXD1Q6UVY6 613 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 TRMT1LQ7Z2T5 733 aaKnown RBP12.45□□□□□ -0.42
PBX1-213ENST00000558796 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
PBX1-213ENST00000558796 DIS3L2Q8IYB7 885 aaKnown RBP12.45□□□□□ -0.42
PBX1-213ENST00000558796 ETNPPLQ8TBG4 499 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 TNFRSF25Q93038 417 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 UNC45AQ9H3U1 944 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 SLC4A7Q9Y6M7 1214 aa12.45□□□□□ -0.42
PBX1-213ENST00000558796 IGSF9BQ9UPX0 1349 aa12.44□□□□□ -0.42
PBX1-213ENST00000558796 MBLAC1A4D2B0 266 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms