RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ST3GAL2Q16842 350 aa13.91□□□□□ -0.18
SMAD3-206ENST00000558739 RSPO4Q2I0M5 234 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-206ENST00000558739 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
SMAD3-206ENST00000558739 RTN4RL1Q86UN2 441 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-206ENST00000558739 RGS22Q8NE09 1264 aa13.91□□□□□ -0.18
SMAD3-206ENST00000558739 CYP2W1Q8TAV3 490 aa13.91□□□□□ -0.18
SMAD3-206ENST00000558739 IWS1Q96ST2 819 aa13.91□□□□□ -0.18
SMAD3-206ENST00000558739 HINFPQ9BQA5 517 aa13.91□□□□□ -0.18
SMAD3-206ENST00000558739 DSPP15924 2871 aaKnown RBP13.91□□□□□ -0.18
SMAD3-206ENST00000558739 OPLAHO14841 1288 aa13.9□□□□□ -0.18
SMAD3-206ENST00000558739 TOP1P11387 765 aaKnown RBP13.9□□□□□ -0.18
SMAD3-206ENST00000558739 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-206ENST00000558739 AOC1P19801 751 aa13.9□□□□□ -0.18
SMAD3-206ENST00000558739 COL9A2Q14055 689 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-206ENST00000558739 CDC37Q16543 378 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-206ENST00000558739 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
SMAD3-206ENST00000558739 PLPP4Q5VZY2 271 aa13.9□□□□□ -0.18
SMAD3-206ENST00000558739 DTWD2Q8NBA8 298 aa13.9□□□□□ -0.18
SMAD3-206ENST00000558739 ZBTB10Q96DT7 871 aa13.9□□□□□ -0.18
SMAD3-206ENST00000558739 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
SMAD3-206ENST00000558739 UBA5Q9GZZ9 404 aa13.9□□□□□ -0.18
SMAD3-206ENST00000558739 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.19
SMAD3-206ENST00000558739 SMG1Q96Q15 3661 aaKnown RBP13.89□□□□□ -0.19
SMAD3-206ENST00000558739 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 FSCN2O14926 492 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 SNHG28P0DPA3 235 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 CD52P31358 61 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 FBXO47Q5MNV8 452 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 RIN2Q8WYP3 895 aaPredicted RBP13.89□□□□□ -0.19
SMAD3-206ENST00000558739 LIMD1Q9UGP4 676 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 NR2E1Q9Y466 385 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 NBEAQ8NFP9 2946 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 DENND4AQ7Z401 1863 aa13.89□□□□□ -0.19
SMAD3-206ENST00000558739 RRP12Q5JTH9 1297 aaKnown RBP13.88□□□□□ -0.19
SMAD3-206ENST00000558739 VPS53Q5VIR6 699 aa13.88□□□□□ -0.19
SMAD3-206ENST00000558739 KANK3Q6NY19 840 aa13.88□□□□□ -0.19
SMAD3-206ENST00000558739 TMEM184AQ6ZMB5 413 aa13.88□□□□□ -0.19
SMAD3-206ENST00000558739 PDCD2LQ9BRP1 358 aa13.88□□□□□ -0.19
SMAD3-206ENST00000558739 ERVK-5Q9HDB9 667 aa13.88□□□□□ -0.19
SMAD3-206ENST00000558739 ABCB11O95342 1321 aa13.88□□□□□ -0.19
SMAD3-206ENST00000558739 ORC4O43929 436 aa13.87□□□□□ -0.19
SMAD3-206ENST00000558739 RAB11FIP3O75154 756 aa13.87□□□□□ -0.19
SMAD3-206ENST00000558739 FGF18O76093 207 aa13.87□□□□□ -0.19
SMAD3-206ENST00000558739 CFBP00751 764 aa13.87□□□□□ -0.19
SMAD3-206ENST00000558739 NPAS4Q8IUM7 802 aa13.87□□□□□ -0.19
SMAD3-206ENST00000558739 TOMM22Q9NS69 142 aa13.87□□□□□ -0.19
SMAD3-206ENST00000558739 PNMA2Q9UL42 364 aa13.87□□□□□ -0.19
SMAD3-206ENST00000558739 QRICH1Q2TAL8 776 aa13.86□□□□□ -0.19
SMAD3-206ENST00000558739 UTP14CQ5TAP6 766 aaKnown RBP13.86□□□□□ -0.19
SMAD3-206ENST00000558739 TSHZ1Q6ZSZ6 1077 aa13.86□□□□□ -0.19
SMAD3-206ENST00000558739 SIX5Q8N196 739 aa13.86□□□□□ -0.19
SMAD3-206ENST00000558739 DNAJB3Q8WWF6 145 aa13.86□□□□□ -0.19
SMAD3-206ENST00000558739 CDCA3Q99618 268 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-206ENST00000558739 MLXIPQ9HAP2 919 aa13.86□□□□□ -0.19
SMAD3-206ENST00000558739 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
SMAD3-206ENST00000558739 TMEM260Q9NX78 707 aa13.86□□□□□ -0.19
SMAD3-206ENST00000558739 CDY2AQ9Y6F7 541 aa13.86□□□□□ -0.19
SMAD3-206ENST00000558739 MAST4O15021 2626 aa13.85□□□□□ -0.19
SMAD3-206ENST00000558739 NOP56O00567 594 aaKnown RBP13.85□□□□□ -0.19
SMAD3-206ENST00000558739 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-206ENST00000558739 HSPD1P10809 573 aaKnown RBP13.85□□□□□ -0.19
SMAD3-206ENST00000558739 SCG2P13521 617 aa13.85□□□□□ -0.19
SMAD3-206ENST00000558739 HOXB3P14651 431 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-206ENST00000558739 HOXA13P31271 388 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-206ENST00000558739 SP4Q02446 784 aa13.85□□□□□ -0.19
SMAD3-206ENST00000558739 PGM5Q15124 567 aa13.85□□□□□ -0.19
SMAD3-206ENST00000558739 THNSL1Q8IYQ7 743 aa13.85□□□□□ -0.19
SMAD3-206ENST00000558739 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
SMAD3-206ENST00000558739 C12orf76Q8N812 135 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-206ENST00000558739 TDRD5Q8NAT2 981 aaKnown RBP13.85□□□□□ -0.19
SMAD3-206ENST00000558739 GPR20Q99678 358 aa13.85□□□□□ -0.19
SMAD3-206ENST00000558739 TCF25Q9BQ70 676 aa13.85□□□□□ -0.19
SMAD3-206ENST00000558739 BAZ2BQ9UIF8 2168 aaKnown RBP13.85□□□□□ -0.19
SMAD3-206ENST00000558739 ITPR1Q14643 2758 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 GNAT1P11488 350 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 PBX3P40426 434 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 HSD17B4P51659 736 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 UBE3AQ05086 875 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 TMEM62Q0P6H9 643 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 SEMA3FQ13275 785 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 SPOUT1Q5T280 376 aaKnown RBP13.84□□□□□ -0.19
SMAD3-206ENST00000558739 CYFIP1Q7L576 1253 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 VSIG10LQ86VR7 867 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 COLGALT1Q8NBJ5 622 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 RASGRP4Q8TDF6 673 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 RUBCNQ92622 972 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 TMX1Q9H3N1 280 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 ENTPD7Q9NQZ7 604 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 AAASQ9NRG9 546 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 HCFC2Q9Y5Z7 792 aa13.84□□□□□ -0.19
SMAD3-206ENST00000558739 C2orf16Q68DN1 1984 aa13.83□□□□□ -0.19
SMAD3-206ENST00000558739 NARSO43776 548 aaKnown RBP13.83□□□□□ -0.2
SMAD3-206ENST00000558739 HMMRO75330 724 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 FGRP09769 529 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 SRGAP2BP0DMP2 458 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 HOXB8P17481 243 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-206ENST00000558739 ATXN1P54253 815 aaKnown RBP13.83□□□□□ -0.2
SMAD3-206ENST00000558739 TMEM266Q2M3C6 531 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 MARCH8Q5T0T0 291 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms