RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 BRAPQ7Z569 592 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 FGD2Q7Z6J4 655 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 CARFQ8N187 725 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 KYQ8NBH2 561 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 SPATA25Q9BR10 227 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 YIPF4Q9BSR8 244 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 CD244Q9BZW8 370 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 TRIM39Q9HCM9 518 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 NGRNQ9NPE2 291 aaKnown RBP4.16□□□□□ -1.74
HERC1-203ENST00000558532 DSEQ9UL01 958 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 KIF14Q15058 1648 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 CC2D2AQ9P2K1 1620 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 RPRD2Q5VT52 1461 aaKnown RBP4.16□□□□□ -1.74
HERC1-203ENST00000558532 UGGT2Q9NYU1 1516 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 SUPT6HQ7KZ85 1726 aaKnown RBP4.15□□□□□ -1.74
HERC1-203ENST00000558532 KDM5CP41229 1560 aa4.15□□□□□ -1.74
HERC1-203ENST00000558532 CCDC144AA2RUR9 1427 aa4.15□□□□□ -1.74
HERC1-203ENST00000558532 CCDC163A0A0D9SF12 145 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 A0A0G2JLL6 359 aaPredicted RBP4.15□□□□□ -1.75
HERC1-203ENST00000558532 CCDC66A2RUB6 948 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 OTOL1A6NHN0 477 aaPredicted RBP4.15□□□□□ -1.75
HERC1-203ENST00000558532 ZNF561-AS1K7EIQ3 104 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 ACOT7O00154 380 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 EFCAB14O75071 495 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 SRGAP2CP0DJJ0 459 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 PDE6AP16499 860 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 FAHP16930 419 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 NAT1P18440 290 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 HOXA5P20719 270 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 GLIPR1L2Q4G1C9 344 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 PAN2Q504Q3 1202 aaKnown RBP4.15□□□□□ -1.75
HERC1-203ENST00000558532 CCDC184Q52MB2 194 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 ABHD17CQ6PCB6 329 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.15□□□□□ -1.75
HERC1-203ENST00000558532 TRIM48Q8IWZ4 208 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 SP8Q8IXZ3 490 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 FEZF2Q8TBJ5 459 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 FBXW5Q969U6 566 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 C20orf173Q96LM9 149 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 ZSWIM3Q96MP5 696 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 CLUHP3Q96NS8 147 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 ZCCHC4Q9H5U6 513 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 SMURF1Q9HCE7 757 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 PCDH18Q9HCL0 1135 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 TMEM260Q9NX78 707 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 NTMQ9P121 344 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 RAPGEFL1Q9UHV5 662 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 SRPK3Q9UPE1 567 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 GAPVD1Q14C86 1478 aa4.15□□□□□ -1.75
HERC1-203ENST00000558532 ARID4BQ4LE39 1312 aaPredicted RBP4.15□□□□□ -1.75
HERC1-203ENST00000558532 KTN1Q86UP2 1357 aaKnown RBP4.14□□□□□ -1.75
HERC1-203ENST00000558532 CUL7Q14999 1698 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 CFTRP13569 1480 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 PLEKHH2Q8IVE3 1493 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 TCRBV16S1A1N1A0A5B0 115 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 MAN2B1O00754 1011 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 PLD2O14939 933 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 RAPGEF3O95398 923 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 HSPA5P11021 654 aaKnown RBP4.14□□□□□ -1.75
HERC1-203ENST00000558532 KCNA6P17658 529 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 RPL13P26373 211 aaKnown RBP4.14□□□□□ -1.75
HERC1-203ENST00000558532 JAM2P57087 298 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 GPR19Q15760 415 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 FSTL4Q6MZW2 842 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 TMC5Q6UXY8 1006 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 ARHGAP36Q6ZRI8 547 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 C16orf59Q7L2K0 433 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 OSTM1Q86WC4 334 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 ZNF761Q86XN6 746 aaPredicted RBP4.14□□□□□ -1.75
HERC1-203ENST00000558532 ZC3H7AQ8IWR0 971 aaKnown RBP4.14□□□□□ -1.75
HERC1-203ENST00000558532 TTLL6Q8N841 843 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 RNPC3Q96LT9 517 aaKnown RBP4.14□□□□□ -1.75
HERC1-203ENST00000558532 CATSPERZQ9NTU4 200 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 COQ6Q9Y2Z9 468 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 BCORL1Q5H9F3 1711 aa4.14□□□□□ -1.75
HERC1-203ENST00000558532 CENPJQ9HC77 1338 aaPredicted RBP4.14□□□□□ -1.75
HERC1-203ENST00000558532 GRIN2BQ13224 1484 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 ESYT3A0FGR9 886 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 FAM90A27PA6NNH2 459 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 RRP9O43818 475 aaKnown RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 SMARCA5O60264 1052 aaPredicted RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 SASH1O94885 1247 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 ZNF28P17035 718 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 KCNC1P48547 511 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 SARSP49591 514 aaKnown RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 DNM2P50570 870 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 LACTBP83111 547 aaPredicted RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 FIGNQ5HY92 759 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 CD276Q5ZPR3 534 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 PTRH1Q86Y79 214 aaKnown RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 NOSTRINQ8IVI9 506 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 CISD2Q8N5K1 135 aaKnown RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 DTX3Q8N9I9 347 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 ADAMTS17Q8TE56 1095 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 ZCCHC14Q8WYQ9 949 aaKnown RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 MAGEB10Q96LZ2 347 aaPredicted RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 TMEM209Q96SK2 561 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 CELF4Q9BZC1 486 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms