RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 PTPN1P18031 435 aaKnown RBP8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 FUT4P22083 530 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 GJA4P35212 333 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 RECQLP46063 649 aaPredicted RBP8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 GPR3P46089 330 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 NXNQ6DKJ4 435 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 DTX1Q86Y01 620 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 DCP2Q8IU60 420 aaKnown RBP8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 NETO2Q8NC67 525 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 FLCNQ8NFG4 579 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 C19orf44Q9H6X5 657 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 TCF7L1Q9HCS4 588 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 C19orf73Q9NVV2 129 aa8.35□□□□□ -1.07
AC012409.1-202ENST00000558449 PCDHGA12O60330 932 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 KDM1AO60341 852 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 H2AFYO75367 372 aaKnown RBP8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 C4BPAP04003 597 aaKnown RBP8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 CT47B1P0C2W7 299 aaPredicted RBP8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 SDHAP31040 664 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 GNALP38405 381 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 KRT85P78386 507 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 ODF1Q14990 250 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 NLRX1Q86UT6 975 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 TRIM48Q8IWZ4 208 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 CPA6Q8N4T0 437 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 RTF1Q92541 710 aaKnown RBP8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 C16orf92Q96LL3 132 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 PDGFDQ9GZP0 370 aaPredicted RBP8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 AP5M1Q9H0R1 490 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 RXFP1Q9HBX9 757 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 GPR160Q9UJ42 338 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 ANKRD6Q9Y2G4 727 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 PCDHB4Q9Y5E5 795 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 PCDHGA9Q9Y5G4 932 aaKnown RBP8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 PCDHGA8Q9Y5G5 932 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 PCDHGA7Q9Y5G6 932 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 PCDHGA6Q9Y5G7 932 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 PCDHGA3Q9Y5H0 932 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 PCDHGA2Q9Y5H1 932 aa8.34□□□□□ -1.07
AC012409.1-202ENST00000558449 TCRBV5S2A0A599 114 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 TRIM75PA6NK02 468 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 PNLIPP16233 465 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 TRHRP34981 398 aaPredicted RBP8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 GDNFP39905 211 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 CATSPEREQ5SY80 951 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 NFXL1Q6ZNB6 911 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 MILR1Q7Z6M3 343 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 CCAR1Q8IX12 1150 aaKnown RBP8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 SIRT2Q8IXJ6 389 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 MAGEB6Q8N7X4 407 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 SHISA4Q96DD7 197 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 ZNF496Q96IT1 587 aaPredicted RBP8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 PAK6Q9NQU5 681 aaPredicted RBP8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 PALD1Q9ULE6 856 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 MRFAP1Q9Y605 127 aa8.33□□□□□ -1.08
AC012409.1-202ENST00000558449 ARID4BQ4LE39 1312 aaPredicted RBP8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 GOLGA6CA6NDK9 693 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 GOLGA6BA6NDN3 693 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 PRAMEF25A6NGN4 478 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 FOXP2O15409 715 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 GOLGA6DP0CG33 693 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 PF4V1P10720 104 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 SPINK2P20155 84 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 SSTR4P31391 388 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 ARL4AP40617 200 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 FNTBP49356 437 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 GALK1P51570 392 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 ADCY1Q08828 1119 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 TCIRG1Q13488 830 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 SNX17Q15036 470 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 EPHA7Q15375 998 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 TPH2Q8IWU9 490 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 AMOTL1Q8IY63 956 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 LILRA2Q8N149 483 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 GOLGA6AQ9NYA3 693 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 MSRAQ9UJ68 235 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 GIT1Q9Y2X7 761 aa8.32□□□□□ -1.08
AC012409.1-202ENST00000558449 ZC3H12DA2A288 527 aaKnown RBP8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 KLHL33A6NCF5 533 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 RASSF10A6NK89 507 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 ACOT7O00154 380 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 XPOTO43592 962 aaKnown RBP8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 CAND2O75155 1236 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 DBHP09172 617 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 TMEM253P0C7T8 217 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 GRIN1Q05586 938 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 CLUL1Q15846 466 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 CXorf57Q6NSI4 855 aaKnown RBP8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 TGFBRAP1Q8WUH2 860 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 MYLIPQ8WY64 445 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 ACAP3Q96P50 834 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 KCNG1Q9UIX4 513 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 NUDT5Q9UKK9 219 aa8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 PNMA8BQ9ULN7 279 aaPredicted RBP8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 ANGEL1Q9UNK9 670 aaKnown RBP8.31□□□□□ -1.08
AC012409.1-202ENST00000558449 SRGAP3O43295 1099 aa8.3□□□□□ -1.08
AC012409.1-202ENST00000558449 IGHA1P01876 353 aa8.3□□□□□ -1.08
AC012409.1-202ENST00000558449 CD97P48960 835 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms