RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 KRT16P08779 473 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 ZBTB48P10074 688 aaPredicted RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 KCNA6P17658 529 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 PFKFB3Q16875 520 aaPredicted RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 LMNTD2Q8IXW0 634 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 EEF2KMTQ96G04 330 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 FMO2Q99518 471 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 SELENOSQ9BQE4 189 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 TMEM109Q9BVC6 243 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 SH3BP1Q9Y3L3 701 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 NOC2LQ9Y3T9 749 aaKnown RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 ASB3Q9Y575 518 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 BCL9O00512 1426 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 STRCP1A6NGW2 1772 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 KRIT1O00522 736 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 NKRFO15226 690 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 TLR2O60603 784 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 SMIM24O75264 130 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 SUN1O94901 812 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 GNAT1P11488 350 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 CDC25CP30307 473 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 GBP1P32455 592 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 PHKA1P46020 1223 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 ASIC1P78348 528 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 PPARDQ03181 441 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 PPP2R5EQ16537 467 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 C6orf118Q5T5N4 469 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 APBB1IPQ7Z5R6 666 aaPredicted RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 SPICE1Q8N0Z3 855 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 KIAA0895Q8NCT3 520 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 RAB3IPQ96QF0 476 aaPredicted RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 PABPC3Q9H361 631 aaKnown RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 SH3GLB2Q9NR46 395 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 FLT1P17948 1338 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 PRKAB2O43741 272 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 PCP11498 1178 aaKnown RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 KCNMA1Q12791 1236 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 ZC3H12AQ5D1E8 599 aaKnown RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 BTNL9Q6UXG8 535 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 LDHAL6AQ6ZMR3 332 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 BLIDQ8IZY5 108 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 LRRC57Q8N9N7 239 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 SPATA5Q8NB90 893 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 NEK9Q8TD19 979 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 TBC1D5Q92609 795 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 PRCCQ92733 491 aaPredicted RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 DDX47Q9H0S4 455 aaKnown RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 ZBTB3Q9H5J0 574 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 AIPL1Q9NZN9 384 aa12.22□□□□□ -0.45
PCAT29-201ENST00000558411 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
PCAT29-201ENST00000558411 CCDC88AQ3V6T2 1871 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 DPPA5A6NC42 116 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
PCAT29-201ENST00000558411 HIP1RO75146 1068 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 PDE8BO95263 885 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 GJB6O95452 261 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 FCER1AP12319 257 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 GNAZP19086 355 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 SNX1Q13596 522 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 FAM83BQ5T0W9 1011 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 LCORLQ8N3X6 602 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 GUF1Q8N442 669 aaKnown RBP12.21□□□□□ -0.45
PCAT29-201ENST00000558411 TRIM7Q9C029 511 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 RXFP1Q9HBX9 757 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 IRAK4Q9NWZ3 460 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 RGL1Q9NZL6 768 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 TTC7AQ9ULT0 858 aaPredicted RBP12.21□□□□□ -0.45
PCAT29-201ENST00000558411 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.45
PCAT29-201ENST00000558411 KIF13BQ9NQT8 1826 aa12.21□□□□□ -0.46
PCAT29-201ENST00000558411 A0A087X0T9 212 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 PP2D1A8MPX8 630 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 FAM228BP0C875 321 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 CCNB1P14635 433 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 PLCG1P19174 1290 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 ALDH3A1P30838 453 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 CABP4P57796 275 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 MXRA7P84157 204 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 PLS1Q14651 629 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 TNFAIP8L3Q5GJ75 292 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 DENND2CQ68D51 928 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 ANO7Q6IWH7 933 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 CABP7Q86V35 215 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 PROM2Q8N271 834 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 SRBD1Q8N5C6 995 aaKnown RBP12.2□□□□□ -0.46
PCAT29-201ENST00000558411 METTL13Q8N6R0 699 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 TBC1D16Q8TBP0 767 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 FBF1Q8TES7 1133 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 ATP8B4Q8TF62 1192 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 LRRC15Q8TF66 581 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 FAM167BQ9BTA0 163 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 AP1M1Q9BXS5 423 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 ZMYND12Q9H0C1 365 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 EPB41L4BQ9H329 900 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 AMACRQ9UHK6 382 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 PCDHA4Q9UN74 947 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 ATP8A1Q9Y2Q0 1164 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 ARL2BPQ9Y2Y0 163 aa12.2□□□□□ -0.46
PCAT29-201ENST00000558411 MEGF6O75095 1541 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms