RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CCDC159P0C7I6 412 aa15.03■□□□□ -0
SPG11-210ENST00000558319 ERFP50548 548 aa15.03■□□□□ -0
SPG11-210ENST00000558319 ARHGDIAP52565 204 aa15.03■□□□□ -0
SPG11-210ENST00000558319 CACNB2Q08289 660 aaPredicted RBP15.03■□□□□ -0
SPG11-210ENST00000558319 C10orf76Q5T2E6 689 aa15.03■□□□□ -0
SPG11-210ENST00000558319 TRIM42Q8IWZ5 723 aa15.03■□□□□ -0
SPG11-210ENST00000558319 GTPBP10A4D1E9 387 aaKnown RBP15.03■□□□□ -0
SPG11-210ENST00000558319 SYT2Q8N9I0 419 aaPredicted RBP15.03■□□□□ -0
SPG11-210ENST00000558319 USP6NLQ92738 828 aa15.03■□□□□ -0
SPG11-210ENST00000558319 SCAF8Q9UPN6 1271 aaKnown RBP15.03■□□□□ -0
SPG11-210ENST00000558319 GOLGA8MH3BSY2 632 aa15.02■□□□□ -0
SPG11-210ENST00000558319 OSBPP22059 807 aa15.02■□□□□ -0
SPG11-210ENST00000558319 ATP2B4P23634 1241 aa15.02■□□□□ -0
SPG11-210ENST00000558319 KIF19Q2TAC6 998 aa15.02■□□□□ -0
SPG11-210ENST00000558319 ZNF589Q86UQ0 364 aaPredicted RBP15.02■□□□□ -0
SPG11-210ENST00000558319 TDRD7Q8NHU6 1098 aaKnown RBP15.02■□□□□ -0
SPG11-210ENST00000558319 TBC1D22AQ8WUA7 517 aa15.02■□□□□ -0
SPG11-210ENST00000558319 SERPINI1Q99574 410 aa15.02■□□□□ -0
SPG11-210ENST00000558319 PITPNM3Q9BZ71 974 aa15.02■□□□□ -0
SPG11-210ENST00000558319 ZNF277Q9NRM2 450 aaPredicted RBP15.02■□□□□ -0
SPG11-210ENST00000558319 IPO11Q9UI26 975 aaKnown RBP15.02■□□□□ -0
SPG11-210ENST00000558319 FMNL1O95466 1100 aaPredicted RBP15.02■□□□□ -0
SPG11-210ENST00000558319 METTL23Q86XA0 190 aa15.02■□□□□ -0
SPG11-210ENST00000558319 TTC17Q96AE7 1141 aa15.02■□□□□ -0
SPG11-210ENST00000558319 SAMSN1Q9NSI8 373 aaKnown RBP15.02■□□□□ -0
SPG11-210ENST00000558319 ADAM21Q9UKJ8 722 aa15.02■□□□□ -0
SPG11-210ENST00000558319 KDM1AO60341 852 aa15.02■□□□□ -0
SPG11-210ENST00000558319 NR2F2P24468 414 aa15.02■□□□□ -0
SPG11-210ENST00000558319 GGCXP38435 758 aa15.02■□□□□ -0
SPG11-210ENST00000558319 EPHB1P54762 984 aa15.02■□□□□ -0
SPG11-210ENST00000558319 RINLQ6ZS11 566 aa15.02■□□□□ -0
SPG11-210ENST00000558319 TEX2Q8IWB9 1127 aa15.02■□□□□ -0
SPG11-210ENST00000558319 FMO2Q99518 471 aa15.02■□□□□ -0
SPG11-210ENST00000558319 SYNDIG1Q9H7V2 258 aa15.02■□□□□ -0
SPG11-210ENST00000558319 GINM1Q9NU53 330 aa15.02■□□□□ -0
SPG11-210ENST00000558319 CPSF3Q9UKF6 684 aaKnown RBP15.02■□□□□ -0
SPG11-210ENST00000558319 SUGT1Q9Y2Z0 365 aa15.02■□□□□ -0
SPG11-210ENST00000558319 ARHGEF9O43307 516 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 SYCP2LQ5T4T6 812 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 ALS2CLQ60I27 953 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 DCAF15Q66K64 600 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 PCGF5Q86SE9 256 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 GLT8D2Q9H1C3 349 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 PPARGC1AQ9UBK2 798 aaKnown RBP15.02□□□□□ -0.01
SPG11-210ENST00000558319 PCDHA13Q9Y5I0 950 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 CHUKO15111 745 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 C21orf2O43822 256 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 CA4P22748 312 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 NUMBP49757 651 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 MCF2L2Q86YR7 1114 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 TRIML1Q8N9V2 468 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 ZBTB38Q8NAP3 1195 aaPredicted RBP15.02□□□□□ -0.01
SPG11-210ENST00000558319 CNKSR1Q969H4 720 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 TUBB6Q9BUF5 446 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 DDX28Q9NUL7 540 aaKnown RBP15.02□□□□□ -0.01
SPG11-210ENST00000558319 MAN1B1Q9UKM7 699 aa15.02□□□□□ -0.01
SPG11-210ENST00000558319 CCDC195A0A1B0GUA6 201 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 CCDC151A5D8V7 595 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 OCRLQ01968 901 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 NR5A1Q13285 461 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 C1orf146Q5VVC0 180 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 TBCKQ8TEA7 893 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 GDAQ9Y2T3 454 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 WBP4O75554 376 aaKnown RBP15.01□□□□□ -0.01
SPG11-210ENST00000558319 PHKG2P15735 406 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 HLA-DPA1P20036 260 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 KIF11P52732 1056 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 PTPRKQ15262 1439 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 LBHD1Q9BQE6 289 aaPredicted RBP15.01□□□□□ -0.01
SPG11-210ENST00000558319 SARS2Q9NP81 518 aaKnown RBP15.01□□□□□ -0.01
SPG11-210ENST00000558319 MIS18BP1Q6P0N0 1132 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 UNC5CLQ8IV45 518 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 MAP7D3Q8IWC1 876 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 PIGOQ8TEQ8 1089 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 ZNF274Q96GC6 653 aaPredicted RBP15.01□□□□□ -0.01
SPG11-210ENST00000558319 AIFM3Q96NN9 605 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 ECT2Q9H8V3 914 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
SPG11-210ENST00000558319 DR1Q01658 176 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 CYP27A1Q02318 531 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 TRIM67Q6ZTA4 783 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 KDELC2Q7Z4H8 507 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 LCORLQ8N3X6 602 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 WDR48Q8TAF3 677 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 EPC1Q9H2F5 836 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 ADCY9O60503 1353 aa15.01□□□□□ -0.01
SPG11-210ENST00000558319 POLR3AO14802 1390 aaPredicted RBP15.01□□□□□ -0.01
SPG11-210ENST00000558319 BLVRAP53004 296 aa15□□□□□ -0.01
SPG11-210ENST00000558319 DSCC1Q9BVC3 393 aa15□□□□□ -0.01
SPG11-210ENST00000558319 AFF4Q9UHB7 1163 aaKnown RBP15□□□□□ -0.01
SPG11-210ENST00000558319 TLK1Q9UKI8 766 aa15□□□□□ -0.01
SPG11-210ENST00000558319 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
SPG11-210ENST00000558319 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
SPG11-210ENST00000558319 TYW5A2RUC4 315 aaKnown RBP15□□□□□ -0.01
SPG11-210ENST00000558319 SERPINB2P05120 415 aa15□□□□□ -0.01
SPG11-210ENST00000558319 EIF4A3P38919 411 aaKnown RBP15□□□□□ -0.01
SPG11-210ENST00000558319 YWHAHQ04917 246 aaPredicted RBP15□□□□□ -0.01
SPG11-210ENST00000558319 PDZD4Q76G19 769 aaPredicted RBP15□□□□□ -0.01
SPG11-210ENST00000558319 NEK9Q8TD19 979 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms