RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 EP400NLQ6ZTU2 488 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 Q6ZUG5 572 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 TRAPPC12Q8WVT3 735 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 APBB2Q92870 758 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 CDY2AQ9Y6F7 541 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 BACH1O14867 736 aa17.73■□□□□ 0.43
TPM1-211ENST00000558314 MAFGO15525 162 aa17.73■□□□□ 0.43
TPM1-211ENST00000558314 FOSP01100 380 aaPredicted RBP17.73■□□□□ 0.43
TPM1-211ENST00000558314 INSRRP14616 1297 aa17.73■□□□□ 0.43
TPM1-211ENST00000558314 ADD1P35611 737 aaKnown RBP17.73■□□□□ 0.43
TPM1-211ENST00000558314 ACTR2P61160 394 aa17.73■□□□□ 0.43
TPM1-211ENST00000558314 BRF1Q92994 677 aa17.73■□□□□ 0.43
TPM1-211ENST00000558314 TOP1MTQ969P6 601 aa17.73■□□□□ 0.43
TPM1-211ENST00000558314 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
TPM1-211ENST00000558314 BARHL2Q9NY43 387 aa17.73■□□□□ 0.43
TPM1-211ENST00000558314 MICAL3Q7RTP6 2002 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 KAT6AQ92794 2004 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
TPM1-211ENST00000558314 HTRA4P83105 476 aaPredicted RBP17.72■□□□□ 0.43
TPM1-211ENST00000558314 FUT2Q10981 343 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 GPM6BQ13491 265 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 LPIN1Q14693 890 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 EPC2Q52LR7 807 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 CEP55Q53EZ4 464 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 FAM26DQ5JW98 314 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 TRMT1LQ7Z2T5 733 aaKnown RBP17.72■□□□□ 0.43
TPM1-211ENST00000558314 PCYT2Q99447 389 aa17.72■□□□□ 0.43
TPM1-211ENST00000558314 AGO4Q9HCK5 861 aaKnown RBP17.72■□□□□ 0.43
TPM1-211ENST00000558314 RRN3P2A6NIE6 340 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 M0QZ92 97 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 STAT5BP51692 787 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 MRPS6P82932 125 aaKnown RBP17.71■□□□□ 0.43
TPM1-211ENST00000558314 ITGB3BPQ13352 177 aaPredicted RBP17.71■□□□□ 0.43
TPM1-211ENST00000558314 MKRN4PQ13434 485 aaPredicted RBP17.71■□□□□ 0.43
TPM1-211ENST00000558314 PLCB4Q15147 1175 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 PTPROQ16827 1216 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 TSGA10IPQ3SY00 556 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 MARCH8Q5T0T0 291 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 PLA2G4DQ86XP0 818 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 TMEM192Q8IY95 271 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 FIBCD1Q8N539 461 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 IL17RAQ96F46 866 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 FAM217BQ9NTX9 383 aaPredicted RBP17.71■□□□□ 0.43
TPM1-211ENST00000558314 LMCD1Q9NZU5 365 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 GINS2Q9Y248 185 aa17.71■□□□□ 0.43
TPM1-211ENST00000558314 hCG_1984214I3L0E3 225 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 CD52P31358 61 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 CTNNB1P35222 781 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
TPM1-211ENST00000558314 MGAT3Q09327 533 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 AP3B2Q13367 1082 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 FBXO47Q5MNV8 452 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 ZNF713Q8N859 430 aaPredicted RBP17.7■□□□□ 0.42
TPM1-211ENST00000558314 SP7Q8TDD2 431 aaPredicted RBP17.7■□□□□ 0.42
TPM1-211ENST00000558314 GLT8D2Q9H1C3 349 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 TCEAL9Q9UHQ7 104 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 SNX14Q9Y5W7 946 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 NFASCO94856 1347 aa17.7■□□□□ 0.42
TPM1-211ENST00000558314 CCDC196A0A1B0GTZ2 297 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 POTEB3A0JP26 581 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 MBLAC1A4D2B0 266 aaPredicted RBP17.69■□□□□ 0.42
TPM1-211ENST00000558314 SCG2P13521 617 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 KCNA5P22460 613 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 SREBF1P36956 1147 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 PFKFB3Q16875 520 aaPredicted RBP17.69■□□□□ 0.42
TPM1-211ENST00000558314 IER5Q5VY09 327 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 POTEBQ6S5H4 581 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 TSHZ1Q6ZSZ6 1077 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 CKAP2LQ8IYA6 745 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 TNPO1Q92973 898 aaKnown RBP17.69■□□□□ 0.42
TPM1-211ENST00000558314 PHKBQ93100 1093 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 UBE2ZQ9H832 354 aaPredicted RBP17.69■□□□□ 0.42
TPM1-211ENST00000558314 C6orf50Q9HD87 102 aa17.69■□□□□ 0.42
TPM1-211ENST00000558314 SIP14410 1827 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 MEIS1O00470 390 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 ENPP3O14638 875 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 ADAMTS3O15072 1205 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
TPM1-211ENST00000558314 FAM160B1Q5W0V3 765 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 RASGRP4Q8TDF6 673 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 SAMD11Q96NU1 681 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 PPP1R16BQ96T49 567 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 AGO3Q9H9G7 860 aaKnown RBP17.68■□□□□ 0.42
TPM1-211ENST00000558314 TRPV2Q9Y5S1 764 aa17.68■□□□□ 0.42
TPM1-211ENST00000558314 FAM86B1E9PN63 330 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 CCNE2O96020 404 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 FAM86B2P0C5J1 330 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 COL9A1P20849 921 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 CLK2P49760 499 aaKnown RBP17.67■□□□□ 0.42
TPM1-211ENST00000558314 PAK2Q13177 524 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 BTG3Q14201 252 aaPredicted RBP17.67■□□□□ 0.42
TPM1-211ENST00000558314 TMEM266Q2M3C6 531 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 SWSAP1Q6NVH7 229 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 PDXDC2PQ6P474 469 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 PLPPR4Q7Z2D5 763 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 RPAINQ86UA6 219 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
TPM1-211ENST00000558314 CCDC12Q8WUD4 166 aaPredicted RBP17.67■□□□□ 0.42
TPM1-211ENST00000558314 MRPL38Q96DV4 380 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms