RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 EPC2Q52LR7 807 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 FAM43BQ6ZT52 329 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 PLPPR4Q7Z2D5 763 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 SPRED2Q7Z698 418 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 CCDC12Q8WUD4 166 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 C17orf80Q9BSJ5 609 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 TRPC6Q9Y210 931 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 MUC3AQ02505 3323 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 CNTNAP5Q8WYK1 1306 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 MEIS1O00470 390 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 INSRRP14616 1297 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 STAT5BP51692 787 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 IGBP1P78318 339 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 FUT2Q10981 343 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 NIPA1Q7RTP0 329 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 TMEM192Q8IY95 271 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 RASEFQ8IZ41 740 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 FIBCD1Q8N539 461 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 DNAJB3Q8WWF6 145 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 MRPL38Q96DV4 380 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 TCEANC2Q96MN5 208 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 ANO3Q9BYT9 981 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 RWDD3Q9Y3V2 267 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 SQORQ9Y6N5 450 aa15.52■□□□□ 0.08
SNRPA1-204ENST00000558020 MICAL3Q7RTP6 2002 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 STXBP3O00186 592 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 GHRP10912 638 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 SREBF1P36956 1147 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 METAP2P50579 478 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 ACTR2P61160 394 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 MRPS6P82932 125 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 AKAP17AQ02040 695 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 GPM6BQ13491 265 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 LPIN1Q14693 890 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 ADCK5Q3MIX3 580 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 MARCH8Q5T0T0 291 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 NME8Q8N427 588 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 CYP2W1Q8TAV3 490 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 FTHL17Q9BXU8 183 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 AGO4Q9HCK5 861 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 C6orf50Q9HD87 102 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 PCDHA2Q9Y5H9 948 aa15.51■□□□□ 0.07
SNRPA1-204ENST00000558020 TCF20Q9UGU0 1960 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 POTEB3A0JP26 581 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 H3BNC9 293 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 ENPP3O14638 875 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 RB1P06400 928 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 ARP10275 920 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 PFKFB3Q16875 520 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 TIGD5Q53EQ6 642 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 FBXO47Q5MNV8 452 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 FAM160B1Q5W0V3 765 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 BLOC1S2Q6QNY1 142 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 POTEBQ6S5H4 581 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 TSHZ1Q6ZSZ6 1077 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 FAM49AQ9H0Q0 323 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 TCEAL9Q9UHQ7 104 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 CDY2AQ9Y6F7 541 aa15.5■□□□□ 0.07
SNRPA1-204ENST00000558020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 BACH1O14867 736 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 NCK2O43639 380 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 REC8O95072 547 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 ATG7O95352 703 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 SCG2P13521 617 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 PSMA5P28066 241 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 GNA11P29992 359 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 ADD1P35611 737 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 MGAT3Q09327 533 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 PUS10Q3MIT2 529 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 TYW1BQ6NUM6 668 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 BANK1Q8NDB2 785 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 BICD2Q8TD16 824 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 JAKMIP1Q96N16 626 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 NECAB3Q96P71 396 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 OSBPL7Q9BZF2 842 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 UBE2ZQ9H832 354 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 FAM217BQ9NTX9 383 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 SIP14410 1827 aa15.49■□□□□ 0.07
SNRPA1-204ENST00000558020 ESYT2A0FGR8 921 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 HBP1O60381 514 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 CDC27P30260 824 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 CLK2P49760 499 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 PLCB4Q15147 1175 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 ODR4Q5SWX8 454 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 JAKMIP3Q5VZ66 844 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 MIS18BP1Q6P0N0 1132 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 Q6ZUG5 572 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 PLA2G4DQ86XP0 818 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 REXO1Q8N1G1 1221 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 KCNB2Q92953 911 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 CCDC136Q96JN2 1154 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 PGBD1Q96JS3 809 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 PCYT2Q99447 389 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 C11orf84Q9BUA3 381 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 ZMYND12Q9H0C1 365 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 TBC1D22BQ9NU19 505 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms