RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 WNT10BO00744 389 aa14.53□□□□□ -0.08
CPNE6-204ENST00000557829 CES2O00748 559 aa14.53□□□□□ -0.08
CPNE6-204ENST00000557829 EIF3HO15372 352 aaKnown RBP eCLIP14.53□□□□□ -0.08
CPNE6-204ENST00000557829 RPS12P25398 132 aaKnown RBP14.53□□□□□ -0.08
CPNE6-204ENST00000557829 ZNF280AP59817 542 aaPredicted RBP14.53□□□□□ -0.08
CPNE6-204ENST00000557829 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
CPNE6-204ENST00000557829 NAB2Q15742 525 aa14.53□□□□□ -0.08
CPNE6-204ENST00000557829 HYIQ5T013 277 aa14.53□□□□□ -0.08
CPNE6-204ENST00000557829 RBM26Q5T8P6 1007 aaKnown RBP14.53□□□□□ -0.08
CPNE6-204ENST00000557829 SFMBT2Q5VUG0 894 aa14.53□□□□□ -0.08
CPNE6-204ENST00000557829 DDX12PQ92771 950 aa14.53□□□□□ -0.08
CPNE6-204ENST00000557829 NAP1L4Q99733 375 aaKnown RBP14.53□□□□□ -0.08
CPNE6-204ENST00000557829 ENTPD3O75355 529 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 HLA-DOAP06340 250 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 SHMT1P34896 483 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 TTC31Q49AM3 519 aaPredicted RBP14.52□□□□□ -0.08
CPNE6-204ENST00000557829 C9orf131Q5VYM1 1079 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 DYMQ7RTS9 669 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 CD302Q8IX05 232 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 MICALL2Q8IY33 904 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 EIF1ADQ8N9N8 165 aaKnown RBP14.52□□□□□ -0.08
CPNE6-204ENST00000557829 RUFY1Q96T51 708 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 SALL4Q9UJQ4 1053 aa14.52□□□□□ -0.08
CPNE6-204ENST00000557829 MYH7BA7E2Y1 1941 aa14.52□□□□□ -0.09
CPNE6-204ENST00000557829 BTNL10A8MVZ5 291 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 EBAG9O00559 213 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 EDIL3O43854 480 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 GFPT1Q06210 699 aaPredicted RBP14.51□□□□□ -0.09
CPNE6-204ENST00000557829 C10orf76Q5T2E6 689 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 SAMD7Q7Z3H4 446 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 SNX29Q8TEQ0 813 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 ZBTB9Q96C00 473 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 DNAJC19Q96DA6 116 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 MTMR8Q96EF0 704 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 CEP95Q96GE4 821 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 DRC1Q96MC2 740 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 CPVLQ9H3G5 476 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 VEZTQ9HBM0 779 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 BMP2KQ9NSY1 1161 aaPredicted RBP14.51□□□□□ -0.09
CPNE6-204ENST00000557829 TMEM260Q9NX78 707 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 CNTNAP1P78357 1384 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 AKR1B1P15121 316 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 GCFC2P16383 781 aaKnown RBP14.51□□□□□ -0.09
CPNE6-204ENST00000557829 PAK2Q13177 524 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 ZC3H3Q8IXZ2 948 aaKnown RBP14.51□□□□□ -0.09
CPNE6-204ENST00000557829 NT5C3AQ9H0P0 336 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 EHD4Q9H223 541 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 DHX36Q9H2U1 1008 aaKnown RBP14.51□□□□□ -0.09
CPNE6-204ENST00000557829 AIPL1Q9NZN9 384 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 TMOD2Q9NZR1 351 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 RNF181Q9P0P0 153 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 CNOT7Q9UIV1 285 aaKnown RBP14.51□□□□□ -0.09
CPNE6-204ENST00000557829 SCAF8Q9UPN6 1271 aaKnown RBP14.51□□□□□ -0.09
CPNE6-204ENST00000557829 PCDHGC5Q9Y5F6 944 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 ATXN2Q99700 1313 aaKnown RBP14.51□□□□□ -0.09
CPNE6-204ENST00000557829 KDM3AQ9Y4C1 1321 aa14.51□□□□□ -0.09
CPNE6-204ENST00000557829 USP17L5A8MUK1 530 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SLC37A4O43826 429 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 NOL4O94818 638 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SNHG28P0DPA3 235 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 PDHBP11177 359 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 YY1P25490 414 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SLC1A4P43007 532 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SLC7A5Q01650 507 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 COASYQ13057 564 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 FAM83BQ5T0W9 1011 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SPATS2Q86XZ4 545 aaKnown RBP14.5□□□□□ -0.09
CPNE6-204ENST00000557829 CDAN1Q8IWY9 1227 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SUGP1Q8IWZ8 645 aaKnown RBP14.5□□□□□ -0.09
CPNE6-204ENST00000557829 IQCKQ8N0W5 287 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 VAT1LQ9HCJ6 419 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 RBM12Q9NTZ6 932 aaKnown RBP14.5□□□□□ -0.09
CPNE6-204ENST00000557829 PI4KBQ9UBF8 816 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 ATP8B3O60423 1300 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 ASTN2O75129 1339 aaPredicted RBP14.5□□□□□ -0.09
CPNE6-204ENST00000557829 ATRNL1Q5VV63 1379 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 DICER1Q9UPY3 1922 aaKnown RBP14.5□□□□□ -0.09
CPNE6-204ENST00000557829 GRIN2DO15399 1336 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SLC18A3Q16572 532 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SHROOM1Q2M3G4 852 aaPredicted RBP14.5□□□□□ -0.09
CPNE6-204ENST00000557829 CCDC40Q4G0X9 1142 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 TBC1D10BQ4KMP7 808 aaPredicted RBP14.5□□□□□ -0.09
CPNE6-204ENST00000557829 MEI1Q5TIA1 1274 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 CLEC10AQ8IUN9 316 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 TSEN2Q8NCE0 465 aaKnown RBP14.5□□□□□ -0.09
CPNE6-204ENST00000557829 TANGO6Q9C0B7 1094 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 SWAP70Q9UH65 585 aa14.5□□□□□ -0.09
CPNE6-204ENST00000557829 TRAF5O00463 557 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 NCK2O43639 380 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 ZEB2O60315 1214 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 TDP2O95551 362 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 MATR3P43243 847 aaKnown RBP eCLIP14.49□□□□□ -0.09
CPNE6-204ENST00000557829 CLK2P49760 499 aaKnown RBP14.49□□□□□ -0.09
CPNE6-204ENST00000557829 GNGT1P63211 74 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 TDRD12Q587J7 1177 aaKnown RBP14.49□□□□□ -0.09
CPNE6-204ENST00000557829 FAM26FQ5R3K3 315 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 TADA2BQ86TJ2 420 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 TRIM59Q8IWR1 403 aa14.49□□□□□ -0.09
CPNE6-204ENST00000557829 CCDC65Q8IXS2 484 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms