RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 FAM47CQ5HY64 1035 aa9.38□□□□□ -0.91
RD3L-201ENST00000557640 IQSEC1Q6DN90 963 aa9.38□□□□□ -0.91
RD3L-201ENST00000557640 GDF6Q6KF10 455 aaPredicted RBP9.38□□□□□ -0.91
RD3L-201ENST00000557640 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
RD3L-201ENST00000557640 FAM160B2Q86V87 743 aa9.38□□□□□ -0.91
RD3L-201ENST00000557640 RPUSD2Q8IZ73 545 aaKnown RBP9.38□□□□□ -0.91
RD3L-201ENST00000557640 OR6J1Q8NGC5 347 aa9.38□□□□□ -0.91
RD3L-201ENST00000557640 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
RD3L-201ENST00000557640 MTG1Q9BT17 334 aaPredicted RBP9.38□□□□□ -0.91
RD3L-201ENST00000557640 UBE2ZQ9H832 354 aaPredicted RBP9.38□□□□□ -0.91
RD3L-201ENST00000557640 Q9Y3F1 56 aa9.38□□□□□ -0.91
RD3L-201ENST00000557640 FRMPD2Q68DX3 1309 aaPredicted RBP9.37□□□□□ -0.91
RD3L-201ENST00000557640 LINC01553A4QN01 128 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 PI4K2BG5E9Z4 385 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 MEN1O00255 615 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 ZEB2O60315 1214 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 PLA2G6O60733 806 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 NBNO60934 754 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 HMMRO75330 724 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 NOVP48745 357 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 CLK2P49760 499 aaKnown RBP9.37□□□□□ -0.91
RD3L-201ENST00000557640 VPS53Q5VIR6 699 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 ZSCAN25Q6NSZ9 544 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.37□□□□□ -0.91
RD3L-201ENST00000557640 KAT2BQ92831 832 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 OXCT2Q9BYC2 517 aaPredicted RBP9.37□□□□□ -0.91
RD3L-201ENST00000557640 OSBPL7Q9BZF2 842 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 LRRCC1Q9C099 1032 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 SUGCTQ9HAC7 445 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 CYLDQ9NQC7 956 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 ECHDC1Q9NTX5 307 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
RD3L-201ENST00000557640 DMDP11532 3685 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 A6NJR5 290 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 RFC2P35250 354 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 CPT1AP50416 773 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 CCDC96Q2M329 555 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 TRIM71Q2Q1W2 868 aaKnown RBP9.36□□□□□ -0.91
RD3L-201ENST00000557640 RCSD1Q6JBY9 416 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 NFRKBQ6P4R8 1299 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 FAM178BQ8IXR5 827 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 ZNF444Q8N0Y2 327 aaPredicted RBP9.36□□□□□ -0.91
RD3L-201ENST00000557640 PHOSPHO2Q8TCD6 241 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 CHURC1Q8WUH1 139 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 FTOQ9C0B1 505 aaKnown RBP eCLIP9.36□□□□□ -0.91
RD3L-201ENST00000557640 CPVLQ9H3G5 476 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 COL20A1Q9P218 1284 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 DDX19BQ9UMR2 479 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 STX8Q9UNK0 236 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
RD3L-201ENST00000557640 LOXHD1Q8IVV2 1947 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.35□□□□□ -0.91
RD3L-201ENST00000557640 PTPDC1A2A3K4 754 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 BAIAP3O94812 1187 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 CXCL10P02778 98 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 APPP05067 770 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 MMP3P08254 477 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 SUPT20HL2P0C7V6 817 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 ACTN1P12814 892 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 KCNA5P22460 613 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 CALML3P27482 149 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 COL8A1P27658 744 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 ARHGAP1Q07960 439 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 RBL2Q08999 1139 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 POU4F2Q12837 409 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 PPP2R5BQ15173 497 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 ZMYM1Q5SVZ6 1142 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 SYDE2Q5VT97 1194 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 FAM117BQ6P1L5 589 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 BTNL9Q6UXG8 535 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 C17orf80Q9BSJ5 609 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 SEZ6LQ9BYH1 1024 aa9.35□□□□□ -0.91
RD3L-201ENST00000557640 PLXNA3P51805 1871 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 PLXNA4Q9HCM2 1894 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
RD3L-201ENST00000557640 GJB5O95377 273 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 ZNF286BP0CG31 522 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 GNAT2P19087 354 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 MAP2K3P46734 347 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 ERVK-21P61565 698 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 RPS6P62753 249 aaKnown RBP9.34□□□□□ -0.91
RD3L-201ENST00000557640 ZNF200P98182 395 aaPredicted RBP9.34□□□□□ -0.91
RD3L-201ENST00000557640 PTGISQ16647 500 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 CCDC62Q6P9F0 684 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.34□□□□□ -0.91
RD3L-201ENST00000557640 LRRC8DQ7L1W4 858 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 AFG1LQ8WV93 481 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 TBC1D5Q92609 795 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 NAPBQ9H115 298 aa9.34□□□□□ -0.91
RD3L-201ENST00000557640 SALL3Q9BXA9 1300 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 TSPY2A6NKD2 308 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 PRR33A8MZF0 331 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 SHISA8B8ZZ34 492 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 H3BQ06 376 aaPredicted RBP9.33□□□□□ -0.92
RD3L-201ENST00000557640 LGR5O75473 907 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 PDHBP11177 359 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 CKBP12277 381 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 SELPP16109 830 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms