RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 C5orf42Q9H799 3197 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 TTC24A2A3L6 582 aaPredicted RBP6.84□□□□□ -1.31
VPS33B-207ENST00000557470 LGR5O75473 907 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 ATG7O95352 703 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 F2P00734 622 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 GOLGA8HP0CJ92 632 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 SNHG28P0DPA3 235 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 CASTP20810 708 aaKnown RBP6.84□□□□□ -1.31
VPS33B-207ENST00000557470 HTRA4P83105 476 aaPredicted RBP6.84□□□□□ -1.31
VPS33B-207ENST00000557470 ZP2Q05996 745 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 PTPROQ16827 1216 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 KIAA0753Q2KHM9 967 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 EPC2Q52LR7 807 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 TIGD5Q53EQ6 642 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 TCEAL5Q5H9L2 206 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 HFE2Q6ZVN8 426 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 MYOCDQ8IZQ8 938 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 PPTC7Q8NI37 304 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 PRR7Q8TB68 274 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 SYTL5Q8TDW5 730 aaPredicted RBP6.84□□□□□ -1.31
VPS33B-207ENST00000557470 NSUN6Q8TEA1 469 aaKnown RBP6.84□□□□□ -1.31
VPS33B-207ENST00000557470 UBE2Q2Q8WVN8 375 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 UBXN4Q92575 508 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 TBC1D5Q92609 795 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 ANKS1AQ92625 1134 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 TAAR1Q96RJ0 339 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 TCP11L1Q9NUJ3 509 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 DDX41Q9UJV9 622 aaKnown RBP6.84□□□□□ -1.31
VPS33B-207ENST00000557470 INSL6Q9Y581 213 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 ZNF318Q5VUA4 2279 aa6.84□□□□□ -1.31
VPS33B-207ENST00000557470 EMSYQ7Z589 1322 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 H3BNC9 293 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 J3QL48 77 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 HAS3O00219 553 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 FGAP02671 866 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 AMHP03971 560 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 HOXD8P13378 290 aaPredicted RBP6.83□□□□□ -1.32
VPS33B-207ENST00000557470 MX1P20591 662 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 THPOP40225 353 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 COL19A1Q14993 1142 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 ALX1Q15699 326 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 STXBP2Q15833 593 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 CDC37Q16543 378 aaPredicted RBP6.83□□□□□ -1.32
VPS33B-207ENST00000557470 DNAJC14Q6Y2X3 702 aaPredicted RBP6.83□□□□□ -1.32
VPS33B-207ENST00000557470 EP400NLQ6ZTU2 488 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 ADHFE1Q8IWW8 467 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 DBF4BQ8NFT6 615 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 PABPC5Q96DU9 382 aaKnown RBP6.83□□□□□ -1.32
VPS33B-207ENST00000557470 IWS1Q96ST2 819 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 RMDN3Q96TC7 470 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 KATNAL1Q9BW62 490 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 UBA5Q9GZZ9 404 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 CTNNA3Q9UI47 895 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 MICAL3Q7RTP6 2002 aa6.83□□□□□ -1.32
VPS33B-207ENST00000557470 MYO7AQ13402 2215 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 ABCB11O95342 1321 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 USP34Q70CQ2 3546 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 A0A0D9SFI3 127 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 ANKRD62A6NC57 917 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 RSPH10B2B2RC85 870 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 SORBS3O60504 671 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 EIF3JO75822 258 aaKnown RBP6.82□□□□□ -1.32
VPS33B-207ENST00000557470 AVPP01185 164 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 RSPH10BP0C881 870 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 EIF2AK2P19525 551 aaKnown RBP6.82□□□□□ -1.32
VPS33B-207ENST00000557470 LTBRP36941 435 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 HAND2P61296 217 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 GPM6BQ13491 265 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 LAMC2Q13753 1193 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 PLEKHG4Q58EX7 1191 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 GPATCH4Q5T3I0 446 aaKnown RBP6.82□□□□□ -1.32
VPS33B-207ENST00000557470 ARHGEF16Q5VV41 709 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 SERINC5Q86VE9 423 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 TBC1D10CQ8IV04 446 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 TMEM192Q8IY95 271 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 SNIP1Q8TAD8 396 aaKnown RBP6.82□□□□□ -1.32
VPS33B-207ENST00000557470 FAM227BQ96M60 508 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 SAMD11Q96NU1 681 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 YME1L1Q96TA2 773 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 OSBPL7Q9BZF2 842 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 MAF1Q9H063 256 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 KCNH6Q9H252 994 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 NSUN3Q9H649 340 aaKnown RBP6.82□□□□□ -1.32
VPS33B-207ENST00000557470 CLDND1Q9NY35 253 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 PRKAG3Q9UGI9 489 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 RCAN3Q9UKA8 241 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 FAM50BQ9Y247 325 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 MRVI1Q9Y6F6 885 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 KIAA1217Q5T5P2 1943 aa6.82□□□□□ -1.32
VPS33B-207ENST00000557470 ZMYM6O95789 1325 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 NEDD4P46934 1319 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 SALL3Q9BXA9 1300 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 COL4A6Q14031 1691 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 CFAP54Q96N23 3096 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.81□□□□□ -1.32
VPS33B-207ENST00000557470 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
VPS33B-207ENST00000557470 PPFIA4O75335 1185 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 UPP2O95045 317 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 NR3C2P08235 984 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms