RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 RXRAP19793 462 aa19.61■□□□□ 0.73
NEDD1-210ENST00000557400 LIFRP42702 1097 aa19.61■□□□□ 0.73
NEDD1-210ENST00000557400 UBE2SQ16763 222 aa19.61■□□□□ 0.73
NEDD1-210ENST00000557400 MARCH8Q5T0T0 291 aa19.61■□□□□ 0.73
NEDD1-210ENST00000557400 TSHZ1Q6ZSZ6 1077 aa19.61■□□□□ 0.73
NEDD1-210ENST00000557400 CLP1Q92989 425 aaKnown RBP19.61■□□□□ 0.73
NEDD1-210ENST00000557400 CLDND1Q9NY35 253 aa19.61■□□□□ 0.73
NEDD1-210ENST00000557400 CDY2AQ9Y6F7 541 aa19.61■□□□□ 0.73
NEDD1-210ENST00000557400 RRN3P2A6NIE6 340 aa19.6■□□□□ 0.73
NEDD1-210ENST00000557400 GRM6O15303 877 aa19.6■□□□□ 0.73
NEDD1-210ENST00000557400 JADE2Q9NQC1 790 aa19.6■□□□□ 0.73
NEDD1-210ENST00000557400 PRKAG3Q9UGI9 489 aa19.6■□□□□ 0.73
NEDD1-210ENST00000557400 PCDHA6Q9UN73 950 aa19.6■□□□□ 0.73
NEDD1-210ENST00000557400 PCDHA8Q9Y5H6 950 aa19.6■□□□□ 0.73
NEDD1-210ENST00000557400 hCG_1642624A0A1W2PR95 340 aa19.59■□□□□ 0.73
NEDD1-210ENST00000557400 IGBP1P78318 339 aa19.59■□□□□ 0.73
NEDD1-210ENST00000557400 MRPS6P82932 125 aaKnown RBP19.59■□□□□ 0.73
NEDD1-210ENST00000557400 ZP2Q05996 745 aa19.59■□□□□ 0.73
NEDD1-210ENST00000557400 BTG3Q14201 252 aaPredicted RBP19.59■□□□□ 0.73
NEDD1-210ENST00000557400 CTC1Q2NKJ3 1217 aa19.59■□□□□ 0.73
NEDD1-210ENST00000557400 ZNF689Q96CS4 500 aaPredicted RBP19.59■□□□□ 0.73
NEDD1-210ENST00000557400 JPH1Q9HDC5 661 aaPredicted RBP19.59■□□□□ 0.73
NEDD1-210ENST00000557400 SLC12A7Q9Y666 1083 aa19.59■□□□□ 0.73
NEDD1-210ENST00000557400 DCXO43602 365 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 DGKIO75912 1065 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 INSRRP14616 1297 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 LTBRP36941 435 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 HYAL1Q12794 435 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 COL9A3Q14050 684 aaPredicted RBP19.58■□□□□ 0.72
NEDD1-210ENST00000557400 TMTC3Q6ZXV5 915 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 HEATR3Q7Z4Q2 680 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 RAB11FIP4Q86YS3 637 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 ADHFE1Q8IWW8 467 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 CCDC82Q8N4S0 544 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 PCYT2Q99447 389 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 PLVAPQ9BX97 442 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 LSG1Q9H089 658 aaKnown RBP19.58■□□□□ 0.72
NEDD1-210ENST00000557400 FAM49AQ9H0Q0 323 aaPredicted RBP19.58■□□□□ 0.72
NEDD1-210ENST00000557400 AGO3Q9H9G7 860 aaKnown RBP19.58■□□□□ 0.72
NEDD1-210ENST00000557400 SQORQ9Y6N5 450 aa19.58■□□□□ 0.72
NEDD1-210ENST00000557400 SLC27A2O14975 620 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 MMP1P03956 469 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 CD52P31358 61 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 IER5Q5VY09 327 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 FANCBQ8NB91 859 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 LINC01599Q8WXQ3 324 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 TNPO1Q92973 898 aaKnown RBP19.57■□□□□ 0.72
NEDD1-210ENST00000557400 ZBTB10Q96DT7 871 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 AZI2Q9H6S1 392 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 SLC9A2Q9UBY0 812 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 TRPC6Q9Y210 931 aa19.57■□□□□ 0.72
NEDD1-210ENST00000557400 POTEB3A0JP26 581 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 C19orf67A6NJJ6 358 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 M0QZ92 97 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 CSPP1Q1MSJ5 1256 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 POTEBQ6S5H4 581 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 MICU3Q86XE3 530 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 UIMC1Q96RL1 719 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 MXRA8Q9BRK3 442 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 FTHL17Q9BXU8 183 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 KCNH7Q9NS40 1196 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 TRPV2Q9Y5S1 764 aa19.56■□□□□ 0.72
NEDD1-210ENST00000557400 SMAD2Q15796 467 aaKnown RBP19.55■□□□□ 0.72
NEDD1-210ENST00000557400 CREB3L3Q68CJ9 461 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 SGMS1Q86VZ5 419 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 NPAS4Q8IUM7 802 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 TEX2Q8IWB9 1127 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 CMTR2Q8IYT2 770 aaKnown RBP19.55■□□□□ 0.72
NEDD1-210ENST00000557400 CRIPAKQ8N1N5 446 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 P2RX5Q93086 422 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 SDF4Q9BRK5 362 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 LRRC2Q9BYS8 371 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 PLAGL2Q9UPG8 496 aa19.55■□□□□ 0.72
NEDD1-210ENST00000557400 MRPL42Q9Y6G3 142 aaKnown RBP19.55■□□□□ 0.72
NEDD1-210ENST00000557400 NFASCO94856 1347 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 DOCK5Q9H7D0 1870 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 CSPG5O95196 566 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 ACTR2P61160 394 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 DLX2Q07687 328 aaPredicted RBP19.54■□□□□ 0.72
NEDD1-210ENST00000557400 PLCB4Q15147 1175 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 CLUL1Q15846 466 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 WWC2Q6AWC2 1192 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 PLPPR4Q7Z2D5 763 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 RTN4RL1Q86UN2 441 aaPredicted RBP19.54■□□□□ 0.72
NEDD1-210ENST00000557400 POP1Q99575 1024 aaKnown RBP19.54■□□□□ 0.72
NEDD1-210ENST00000557400 ESYT1Q9BSJ8 1104 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 UPF3BQ9BZI7 483 aaKnown RBP19.54■□□□□ 0.72
NEDD1-210ENST00000557400 ALG13Q9NP73 1137 aaKnown RBP19.54■□□□□ 0.72
NEDD1-210ENST00000557400 PADI3Q9ULW8 664 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 PCDHA2Q9Y5H9 948 aa19.54■□□□□ 0.72
NEDD1-210ENST00000557400 IGSF9BQ9UPX0 1349 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 MBTPS2O43462 519 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 TBX10O75333 385 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 STAG3L1P0CL83 205 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 IRS1P35568 1242 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 STAT5BP51692 787 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 TMEM62Q0P6H9 643 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 PAK2Q13177 524 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 SMAD4Q13485 552 aaKnown RBP19.53■□□□□ 0.72
NEDD1-210ENST00000557400 CAMK1Q14012 370 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms