RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 DHX16O60231 1041 aaKnown RBP10.82□□□□□ -0.68
SYNE2-224ENST00000557024 GLP2RO95838 553 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 IGHDP01880 384 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 CHRNA1P02708 482 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 ITGB1P05556 798 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 ICAM3P32942 547 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 HAND2P61296 217 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 ALX1Q15699 326 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 PTPN21Q16825 1174 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 QRICH1Q2TAL8 776 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 FAM26DQ5JW98 314 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 KCNV1Q6PIU1 500 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 CENPQQ7L2Z9 268 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-224ENST00000557024 IL31RAQ8NI17 732 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 OTUD7AQ8TE49 926 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-224ENST00000557024 GPKOWQ92917 476 aaPredicted RBP eCLIP10.82□□□□□ -0.68
SYNE2-224ENST00000557024 ZNF689Q96CS4 500 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-224ENST00000557024 PDCD2LQ9BRP1 358 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 ZKSCAN3Q9BRR0 538 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 PLVAPQ9BX97 442 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 MRPL42Q9Y6G3 142 aaKnown RBP10.82□□□□□ -0.68
SYNE2-224ENST00000557024 TTC41PQ6P2S7 1318 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 CCDC171Q6TFL3 1326 aa10.82□□□□□ -0.68
SYNE2-224ENST00000557024 NOP56O00567 594 aaKnown RBP10.81□□□□□ -0.68
SYNE2-224ENST00000557024 ENPP3O14638 875 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 OPLAHO14841 1288 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 GPR37O15354 613 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 DGKIO75912 1065 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 FGAP02671 866 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 GNAT1P11488 350 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 HOXA13P31271 388 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-224ENST00000557024 HSD17B4P51659 736 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 ARHGAP4P98171 946 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 RBM10P98175 930 aaKnown RBP10.81□□□□□ -0.68
SYNE2-224ENST00000557024 ERMP1Q7Z2K6 904 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 ZBTB33Q86T24 672 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 TRIM50Q86XT4 487 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 KLHL23Q8NBE8 558 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 SPPL3Q8TCT6 385 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 P2RX5Q93086 422 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 VAT1LQ9HCJ6 419 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 KMT2EQ8IZD2 1858 aa10.81□□□□□ -0.68
SYNE2-224ENST00000557024 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-224ENST00000557024 PER2O15055 1255 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 SP100P23497 879 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-224ENST00000557024 LPIN1Q14693 890 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 PGM5Q15124 567 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 PAN2Q504Q3 1202 aaKnown RBP10.8□□□□□ -0.68
SYNE2-224ENST00000557024 RUFY4Q6ZNE9 571 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 VSIG10LQ86VR7 867 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 TBC1D10CQ8IV04 446 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 PNMA1Q8ND90 353 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 LMBR1Q8WVP7 490 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 POF1BQ8WVV4 589 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 DCTPP1Q9H773 170 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 TLE6Q9H808 572 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 EHMT1Q9H9B1 1298 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 JMJD4Q9H9V9 463 aa10.8□□□□□ -0.68
SYNE2-224ENST00000557024 MYO15AQ9UKN7 3530 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 RALGAPA2Q2PPJ7 1873 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 PPFIA3O75145 1194 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 TGFB3P10600 412 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 ATF7P17544 494 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-224ENST00000557024 CCND2P30279 289 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 NBL1P41271 181 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 ID4P47928 161 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 ADAM17P78536 824 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 ASPRV1Q53RT3 343 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 UTP14CQ5TAP6 766 aaKnown RBP10.79□□□□□ -0.68
SYNE2-224ENST00000557024 ANKRD45Q5TZF3 282 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 MFSD6Q6ZSS7 791 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 STOX1Q6ZVD7 989 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 FRMD5Q7Z6J6 570 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
SYNE2-224ENST00000557024 VN1R2Q8NFZ6 395 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 LINC01599Q8WXQ3 324 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 SUSD6Q92537 303 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 RIPOR3Q96MK2 946 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 USP26Q9BXU7 913 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 TELO2Q9Y4R8 837 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 ATG2AQ2TAZ0 1938 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 NEDD4P46934 1319 aa10.79□□□□□ -0.68
SYNE2-224ENST00000557024 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 A0A0D9SFI3 127 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 PPP1R11O60927 126 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-224ENST00000557024 GATMP50440 423 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 SP4Q02446 784 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 MGAT3Q09327 533 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 NAALADL2Q58DX5 795 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 TMEM105Q8N8V8 129 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 MICAL1Q8TDZ2 1067 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 ESR2Q92731 530 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 FAM227BQ96M60 508 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 GPR20Q99678 358 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 APOL5Q9BWW9 433 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 AMNQ9BXJ7 453 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 KAT14Q9H8E8 782 aa10.78□□□□□ -0.68
SYNE2-224ENST00000557024 HELLSQ9NRZ9 838 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms