RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 TRIOBPQ9H2D6 2365 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ADARB2-AS1A8MUL3 147 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 TMEM232C9JQI7 657 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 KLRF2D3W0D1 207 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 M0R082 166 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 CPLX1O14810 134 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 SIN3BO75182 1162 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ALBP02768 609 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 TFRCP02786 760 aaKnown RBP6.13□□□□□ -1.43
ATXN3-244ENST00000556898 HSP90AA1P07900 732 aaKnown RBP6.13□□□□□ -1.43
ATXN3-244ENST00000556898 CALM1P0DP23 149 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 CALM2P0DP24 149 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 CALM3P0DP25 149 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 BMP3P12645 472 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 IFNAR1P17181 557 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ALAS2P22557 587 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 IGFBP4P22692 258 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 CTGFP29279 349 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 DDIT3P35638 169 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 SLC1A4P43007 532 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 NT5C2P49902 561 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 HMGCS2P54868 508 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 PSMA6P60900 246 aaKnown RBP6.13□□□□□ -1.43
ATXN3-244ENST00000556898 PPATQ06203 517 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 PKN1Q16512 942 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 OCLNQ16625 522 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 TREML2Q5T2D2 321 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ANKRD23Q86SG2 305 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 HOMER1Q86YM7 354 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ZNF280CQ8ND82 737 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 GMCL1P1Q8NEA9 526 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ZNF417Q8TAU3 575 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ZNF587Q96SQ5 575 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-244ENST00000556898 GDF15Q99988 308 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 WDR18Q9BV38 432 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 AS3MTQ9HBK9 375 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ORC3Q9UBD5 711 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-244ENST00000556898 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 GPC6Q9Y625 555 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-244ENST00000556898 MYPNQ86TC9 1320 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 PDHXO00330 501 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 DHX16O60231 1041 aaKnown RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 PPP1R11O60927 126 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 VCAM1P19320 739 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 FCGRTP55899 365 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 BACE1P56817 501 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 MOGSQ13724 837 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 GRIK4Q16099 956 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 LRIT3Q3SXY7 679 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 GADL1Q6ZQY3 521 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 RAB44Q7Z6P3 723 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 ADGRF4Q8IZF3 695 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 MICALL1Q8N3F8 863 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 DCAF4Q8WV16 495 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 COA7Q96BR5 231 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 INTS4Q96HW7 963 aaKnown RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 LLPHQ9BRT6 129 aaKnown RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 ALG1Q9BT22 464 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 KIAA1683Q9H0B3 1180 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 RPAP3Q9H6T3 665 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 JMJD4Q9H9V9 463 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 GINM1Q9NU53 330 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 RBM28Q9NW13 759 aaKnown RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 MTMR10Q9NXD2 777 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 KCNJ14Q9UNX9 436 aa6.12□□□□□ -1.43
ATXN3-244ENST00000556898 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-244ENST00000556898 PHIPQ8WWQ0 1821 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 VPS37CA5D8V6 355 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-244ENST00000556898 KIF28PB7ZC32 967 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 PRPF3O43395 683 aaKnown RBP6.11□□□□□ -1.43
ATXN3-244ENST00000556898 DYRK3O43781 588 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 ADCY3O60266 1144 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 NID1P14543 1247 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 SYT1P21579 422 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 KIF5BP33176 963 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 RCAN1P53805 252 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 PRKCZQ05513 592 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 IKQ13123 557 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-244ENST00000556898 QRICH1Q2TAL8 776 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 ASPRV1Q53RT3 343 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 SYDE2Q5VT97 1194 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 LARP1BQ659C4 914 aaKnown RBP6.11□□□□□ -1.43
ATXN3-244ENST00000556898 WWC2Q6AWC2 1192 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 FAM173BQ6P4H8 233 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 CCDC174Q6PII3 467 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 C20orf204Q6ZNR8 217 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 NECAB2Q7Z6G3 386 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 FAM184AQ8NB25 1140 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 RETREG2Q8NC44 543 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 TNFRSF25Q93038 417 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 PAWRQ96IZ0 340 aaKnown RBP6.11□□□□□ -1.43
ATXN3-244ENST00000556898 DEFB118Q96PH6 123 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 PARK7Q99497 189 aaKnown RBP6.11□□□□□ -1.43
ATXN3-244ENST00000556898 MAP3K14Q99558 947 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 C2orf49Q9BVC5 232 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-244ENST00000556898 TANGO6Q9C0B7 1094 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 VPS54Q9P1Q0 977 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 KCNH4Q9UQ05 1017 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms