RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ITGB1P05556 798 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 TROAPQ12815 778 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 GRIK4Q16099 956 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 FBXO47Q5MNV8 452 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 PCNX4Q63HM2 1172 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 USP17L6PQ6QN14 398 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 TRIM67Q6ZTA4 783 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 ADGRD2Q7Z7M1 963 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 RSPH3Q86UC2 560 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 CHD1LQ86WJ1 897 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 SMC5Q8IY18 1101 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 PRSS33Q8NF86 280 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 DNAJB3Q8WWF6 145 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 LINC01599Q8WXQ3 324 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 ZBTB10Q96DT7 871 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 MSLNLQ96KJ4 702 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 AGO3Q9H9G7 860 aaKnown RBP10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 CLEC1BQ9P126 229 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 TUBE1Q9UJT0 475 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 CDY2AQ9Y6F7 541 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 MBLAC1A4D2B0 266 aaPredicted RBP10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 TMEM221A6NGB7 291 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 M0R296 226 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 IFIT3O14879 490 aaKnown RBP10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 ATP9AO75110 1047 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 EYA4O95677 639 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 CD52P31358 61 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 IGBP1P78318 339 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 TRDNQ13061 729 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 MARCH8Q5T0T0 291 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 TSHZ1Q6ZSZ6 1077 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 BMP8AQ7Z5Y6 402 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 RBM23Q86U06 439 aaKnown RBP10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 NLRX1Q86UT6 975 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 CRIPAKQ8N1N5 446 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 EFHBQ8N7U6 833 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 KLHL23Q8NBE8 558 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 SMRP1Q8NCR6 262 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 SPPL3Q8TCT6 385 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 GLG1Q92896 1179 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 P2RX5Q93086 422 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 PPP2R3CQ969Q6 453 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 SNX27Q96L92 541 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 FAM49AQ9H0Q0 323 aaPredicted RBP10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 ERAP1Q9NZ08 941 aa10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 BARX2Q9UMQ3 279 aaPredicted RBP10.4□□□□□ -0.74
HNRNPC-227ENST00000556897 GSTTP1A0A1W2PQM5 241 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 ERICH2A1L162 156 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 MEIS2O14770 477 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 KCNA2P16389 499 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 ITGB5P18084 799 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 NRIP1P48552 1158 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 PTPN5P54829 565 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 MRPS6P82932 125 aaKnown RBP10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 NUCB1Q02818 461 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 TMEM62Q0P6H9 643 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 COASYQ13057 564 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 WTAPQ15007 396 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 PAN2Q504Q3 1202 aaKnown RBP10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 XRRA1Q6P2D8 792 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 RTN4RL1Q86UN2 441 aaPredicted RBP10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 SUGP1Q8IWZ8 645 aaKnown RBP10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 CMTR2Q8IYT2 770 aaKnown RBP10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 POF1BQ8WVV4 589 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 SEPT1Q8WYJ6 367 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 CUL5Q93034 780 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 PKD2L1Q9P0L9 805 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 USP15Q9Y4E8 981 aaPredicted RBP10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 PCDHGC5Q9Y5F6 944 aa10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 PTPRZ1P23471 2315 aaPredicted RBP10.39□□□□□ -0.75
HNRNPC-227ENST00000556897 LOC730098B7Z3J9 87 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 PIK3CDO00329 1044 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 PPFIA3O75145 1194 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 GLP2RO95838 553 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 CYP21A2P08686 494 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 GATMP50440 423 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 ZXDAP98168 799 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 TCF15Q12870 199 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 NAALADL2Q58DX5 795 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 IER5Q5VY09 327 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 CATIPQ7Z7H3 387 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 NPAS4Q8IUM7 802 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 GPRASP2Q96D09 838 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 RRP36Q96EU6 259 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 RPGRIP1Q96KN7 1286 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 FTHL17Q9BXU8 183 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 RWDD1Q9H446 243 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 SMARCAD1Q9H4L7 1026 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 TAF6LQ9Y6J9 622 aa10.38□□□□□ -0.75
HNRNPC-227ENST00000556897 KIAA1671Q9BY89 1806 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 CFAP54Q96N23 3096 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 ZFHX2Q9C0A1 2572 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 M0QZ92 97 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 PER2O15055 1255 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 IGHDP01880 384 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 STAG3L1P0CL83 205 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 SCG2P13521 617 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms