RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 HAUS7Q99871 368 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 PNNQ9H307 717 aaKnown RBP6.12□□□□□ -1.43
ATXN3-243ENST00000556671 TFCP2L1Q9NZI6 479 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 WHRNQ9P202 907 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 CCNL1Q9UK58 526 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-243ENST00000556671 EFR3BQ9Y2G0 817 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 DIS3Q9Y2L1 958 aaKnown RBP6.12□□□□□ -1.43
ATXN3-243ENST00000556671 TOGARAM1Q9Y4F4 1720 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 IRS2Q9Y4H2 1338 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 TUBGCP6Q96RT7 1819 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 MYBBP1AQ9BQG0 1328 aaKnown RBP6.11□□□□□ -1.43
ATXN3-243ENST00000556671 MAPK8IP3Q9UPT6 1336 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 ERVV-2B6SEH9 535 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 CYBBP04839 570 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 DBHP09172 617 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 EIF6P56537 245 aaKnown RBP6.11□□□□□ -1.43
ATXN3-243ENST00000556671 TEFQ10587 303 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 RGS22Q8NE09 1264 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 NLGN2Q8NFZ4 835 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 OR6P1Q8NGX9 317 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 GPRASP2Q96D09 838 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 ZDHHC15Q96MV8 337 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 KLHL25Q9H0H3 589 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 PHAXQ9H814 394 aaKnown RBP6.11□□□□□ -1.43
ATXN3-243ENST00000556671 PDLIM7Q9NR12 457 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 PPP1R1BQ9UD71 204 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-243ENST00000556671 ASAP1Q9ULH1 1129 aa6.11□□□□□ -1.43
ATXN3-243ENST00000556671 C5P01031 1676 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 A0A1W2PQH9 124 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 RNMTO43148 476 aaKnown RBP6.1□□□□□ -1.43
ATXN3-243ENST00000556671 BUB1BO60566 1050 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-243ENST00000556671 TBC1D8O95759 1140 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 IGFBP6P24592 240 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-243ENST00000556671 NCKAP1LP55160 1127 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 SLC39A6Q13433 755 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 DCTN1Q14203 1278 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 GNPTABQ3T906 1256 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 RCSD1Q6JBY9 416 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 PAQR3Q6TCH7 311 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 PRKRIP1Q9H875 184 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-243ENST00000556671 LAS1LQ9Y4W2 734 aaKnown RBP6.1□□□□□ -1.43
ATXN3-243ENST00000556671 RGPD3A6NKT7 1758 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-243ENST00000556671 RGPD4Q7Z3J3 1758 aa6.1□□□□□ -1.43
ATXN3-243ENST00000556671 MYH14Q7Z406 1995 aaKnown RBP6.09□□□□□ -1.43
ATXN3-243ENST00000556671 PARD3Q8TEW0 1356 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 L1CAMP32004 1257 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 GJA8P48165 433 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 ZNF200P98182 395 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-243ENST00000556671 PPP2R5DQ14738 602 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 SLC15A2Q16348 729 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 HEATR6Q6AI08 1181 aaKnown RBP6.09□□□□□ -1.43
ATXN3-243ENST00000556671 MCM10Q7L590 875 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 TTC5Q8N0Z6 440 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 ADCY4Q8NFM4 1077 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 RELTQ969Z4 430 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 MCMBPQ9BTE3 642 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 KRTAP4-2Q9BYR5 136 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 GBP3Q9H0R5 595 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 MIS18AQ9NYP9 233 aa6.09□□□□□ -1.43
ATXN3-243ENST00000556671 RRP7AQ9Y3A4 280 aaKnown RBP6.09□□□□□ -1.43
ATXN3-243ENST00000556671 PALLDQ8WX93 1383 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 A0A1W2PQJ5 194 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 AURKAO14965 403 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 SASH1O94885 1247 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 RIPK4P57078 832 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 HDLBPQ00341 1268 aaKnown RBP6.08□□□□□ -1.44
ATXN3-243ENST00000556671 CAP1Q01518 475 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 SLC7A5Q01650 507 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 VMACQ2NL98 169 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 EEF1DP3Q658K8 133 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 BICRALQ6AI39 1079 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 SMIM5Q71RC9 77 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 NT5DC4Q86YG4 428 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 FAM9BQ8IZU0 186 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 KLHL6Q8WZ60 621 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 SHDQ96IW2 340 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 PWWP2AQ96N64 755 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 PDGFDQ9GZP0 370 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-243ENST00000556671 SLC52A2Q9HAB3 445 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 RTEL1Q9NZ71 1219 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 PCDHB10Q9UN67 800 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-243ENST00000556671 HCFC2Q9Y5Z7 792 aa6.08□□□□□ -1.44
ATXN3-243ENST00000556671 SIPA1L3O60292 1781 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-243ENST00000556671 COL3A1P02461 1466 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-243ENST00000556671 UBR3Q6ZT12 1888 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 EPHX1P07099 455 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 PFKLP17858 780 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 TACR1P25103 407 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 HMGB2P26583 209 aaKnown RBP6.07□□□□□ -1.44
ATXN3-243ENST00000556671 BUD31P41223 144 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-243ENST00000556671 CCDC184Q52MB2 194 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 LINC01356Q8N9X3 169 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 IL17REQ8NFR9 667 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 FGD4Q96M96 766 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 SPON1Q9HCB6 807 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 CGGBP1Q9UFW8 167 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-243ENST00000556671 BCL9O00512 1426 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms