RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 GTF2IRD1Q9UHL9 959 aa11.68□□□□□ -0.54
SCFD1-220ENST00000556486 INSL6Q9Y581 213 aa11.68□□□□□ -0.54
SCFD1-220ENST00000556486 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 TECTAO75443 2155 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 B4DLN1 442 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 LGR5O75473 907 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 AMHP03971 560 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 CTSHP09668 335 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 LTBRP36941 435 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 THPOP40225 353 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 MRPL12P52815 198 aaKnown RBP11.67□□□□□ -0.54
SCFD1-220ENST00000556486 KIAA0753Q2KHM9 967 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 TRIM71Q2Q1W2 868 aaKnown RBP11.67□□□□□ -0.54
SCFD1-220ENST00000556486 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
SCFD1-220ENST00000556486 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 TIGD5Q53EQ6 642 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 CCDC178Q5BJE1 867 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 RRP12Q5JTH9 1297 aaKnown RBP11.67□□□□□ -0.54
SCFD1-220ENST00000556486 RNF135Q8IUD6 432 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 ANKK1Q8NFD2 765 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 YME1L1Q96TA2 773 aa11.67□□□□□ -0.54
SCFD1-220ENST00000556486 NOVA2Q9UNW9 492 aaKnown RBP11.67□□□□□ -0.54
SCFD1-220ENST00000556486 NEDD4P46934 1319 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 KMT2EQ8IZD2 1858 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 H3BNC9 293 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 LINC01565O15544 149 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 GH1P01241 217 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 SKIP12755 728 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 SDSP20132 328 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 HAND2P61296 217 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 HTRA4P83105 476 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-220ENST00000556486 CCDC62Q6P9F0 684 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 DHX37Q8IY37 1157 aaKnown RBP11.66□□□□□ -0.54
SCFD1-220ENST00000556486 TMEM192Q8IY95 271 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 MFSD14AQ96MC6 490 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 TAAR1Q96RJ0 339 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 LNPKQ9C0E8 428 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 NSUN3Q9H649 340 aaKnown RBP11.66□□□□□ -0.54
SCFD1-220ENST00000556486 COL20A1Q9P218 1284 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 RALGAPA2Q2PPJ7 1873 aa11.66□□□□□ -0.54
SCFD1-220ENST00000556486 ZNF213O14771 459 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 GOLGA8HP0CJ92 632 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 CASTP20810 708 aaKnown RBP11.65□□□□□ -0.54
SCFD1-220ENST00000556486 GHRHRQ02643 423 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 NUCB1Q02818 461 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 HYAL1Q12794 435 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 PTK7Q13308 1070 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 ASPRV1Q53RT3 343 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 SESTD1Q86VW0 696 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 IQCA1Q86XH1 822 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 FBXO11Q86XK2 927 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 DSCC1Q9BVC3 393 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 KCNH6Q9H252 994 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 PRKAG3Q9UGI9 489 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 CTNNA3Q9UI47 895 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 FAM50BQ9Y247 325 aa11.65□□□□□ -0.54
SCFD1-220ENST00000556486 ABCB11O95342 1321 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 MYO15AQ9UKN7 3530 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 RSPH10B2B2RC85 870 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 HIP1O00291 1037 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 GRM6O15303 877 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 MBTPS2O43462 519 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 EFCAB14O75071 495 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 RNF40O75150 1001 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 TBX10O75333 385 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 RSPH10BP0C881 870 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 EIF2AK2P19525 551 aaKnown RBP11.64□□□□□ -0.55
SCFD1-220ENST00000556486 CTNNB1P35222 781 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 RBL2Q08999 1139 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 TCF15Q12870 199 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 SMAD2Q15796 467 aaKnown RBP11.64□□□□□ -0.55
SCFD1-220ENST00000556486 DGKDQ16760 1214 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 PHLDB3Q6NSJ2 640 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-220ENST00000556486 IWS1Q96ST2 819 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
SCFD1-220ENST00000556486 UBA5Q9GZZ9 404 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 RWDD1Q9H446 243 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-220ENST00000556486 FKBPLQ9UIM3 349 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
SCFD1-220ENST00000556486 ZFHX2Q9C0A1 2572 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-220ENST00000556486 MYH6P13533 1939 aa11.63□□□□□ -0.55
SCFD1-220ENST00000556486 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 TMEM221A6NGB7 291 aa11.63□□□□□ -0.55
SCFD1-220ENST00000556486 M0R296 226 aa11.63□□□□□ -0.55
SCFD1-220ENST00000556486 STXBP3O00186 592 aa11.63□□□□□ -0.55
SCFD1-220ENST00000556486 GFRA3O60609 400 aa11.63□□□□□ -0.55
SCFD1-220ENST00000556486 PARNO95453 639 aaKnown RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 CDC37Q16543 378 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 MCF2L2Q86YR7 1114 aa11.63□□□□□ -0.55
SCFD1-220ENST00000556486 ENAHQ8N8S7 591 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 SYTL5Q8TDW5 730 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 NSUN6Q8TEA1 469 aaKnown RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 RILPL2Q969X0 211 aa11.63□□□□□ -0.55
SCFD1-220ENST00000556486 ZSCAN10Q96SZ4 725 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 UPF3BQ9BZI7 483 aaKnown RBP11.63□□□□□ -0.55
SCFD1-220ENST00000556486 DOCK5Q9H7D0 1870 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms