RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SLC12A5Q9H2X9 1139 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 TMX1Q9H3N1 280 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 PNMA2Q9UL42 364 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 DIP2AQ14689 1571 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 SETD1BQ9UPS6 1966 aaKnown RBP6.42□□□□□ -1.38
SRP54-211ENST00000556445 ARHGAP23Q9P227 1491 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 NRXN3Q9Y4C0 1643 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 NPHP3-ACAD11A0A0J9YXS1 232 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 IRS4O14654 1257 aaPredicted RBP6.41□□□□□ -1.38
SRP54-211ENST00000556445 N4BP3O15049 544 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 DDAH1O94760 285 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 GJB6O95452 261 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 ITGAVP06756 1048 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 PAMP19021 973 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 PTMSP20962 102 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 SCRN1Q12765 414 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 NR1I3Q14994 352 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 MBLAC2Q68D91 279 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 BICRALQ6AI39 1079 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 PAQR3Q6TCH7 311 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 AMIGO3Q86WK7 504 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 LDHDQ86WU2 507 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 ZNF227Q86WZ6 799 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 CELF2-AS1Q8N7Q2 184 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 MZB1Q8WU39 189 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 BTN2A2Q8WVV5 523 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 HNRNPLLQ8WVV9 542 aaKnown RBP6.41□□□□□ -1.38
SRP54-211ENST00000556445 PPP1R14AQ96A00 147 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 MTA3Q9BTC8 594 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 NKX2-4Q9H2Z4 354 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 GPRC5CQ9NQ84 441 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 CYP26B1Q9NR63 512 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 CLEC1BQ9P126 229 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 ATP7BP35670 1465 aa6.41□□□□□ -1.38
SRP54-211ENST00000556445 TRBV23OR9-2A0A075B6M9 112 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 KLF4O43474 513 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 NUAK1O60285 661 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 THBDP07204 575 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 ZSCAN22P10073 491 aaPredicted RBP6.4□□□□□ -1.38
SRP54-211ENST00000556445 GLI4P10075 376 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 PLS3P13797 630 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 SAFB2Q14151 953 aaKnown RBP eCLIP6.4□□□□□ -1.38
SRP54-211ENST00000556445 CIAPIN1Q6FI81 312 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 C11orf96Q7Z7L8 435 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 SIAH1Q8IUQ4 282 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 IGDCC3Q8IVU1 814 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 CKAP2LQ8IYA6 745 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 NPLOC4Q8TAT6 608 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 SIGLEC10Q96LC7 697 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 C8orf48Q96LL4 319 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 CDK19Q9BWU1 502 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 EPB41L4AQ9HCS5 686 aaPredicted RBP6.4□□□□□ -1.38
SRP54-211ENST00000556445 CNOT6Q9ULM6 557 aaKnown RBP6.4□□□□□ -1.38
SRP54-211ENST00000556445 KCTD3Q9Y597 815 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 PCDHA5Q9Y5H7 936 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 HCFC2Q9Y5Z7 792 aa6.4□□□□□ -1.38
SRP54-211ENST00000556445 PIK3R4Q99570 1358 aa6.4□□□□□ -1.39
SRP54-211ENST00000556445 ANKRD26Q9UPS8 1709 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 A0A1W2PQJ5 194 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 C7orf72A4D263 438 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 CAPNS1P04632 268 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 PI3P19957 117 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 FBLN1P23142 703 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 FOXD4Q12950 439 aaPredicted RBP6.39□□□□□ -1.39
SRP54-211ENST00000556445 SV2CQ496J9 727 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 FBLN7Q53RD9 439 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 ZC3H14Q6PJT7 736 aaKnown RBP6.39□□□□□ -1.39
SRP54-211ENST00000556445 ANKS3Q6ZW76 656 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 LZTR1Q8N653 840 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 FRS2Q8WU20 508 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 MMP19Q99542 508 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 IER2Q9BTL4 223 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 PNNQ9H307 717 aaKnown RBP6.39□□□□□ -1.39
SRP54-211ENST00000556445 GNL3LQ9NVN8 582 aaKnown RBP6.39□□□□□ -1.39
SRP54-211ENST00000556445 GULP1Q9UBP9 304 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 PLA2G2DQ9UNK4 145 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 RWDD3Q9Y3V2 267 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 IRAK3Q9Y616 596 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 IRS2Q9Y4H2 1338 aa6.39□□□□□ -1.39
SRP54-211ENST00000556445 ARID1BQ8NFD5 2236 aaPredicted RBP6.38□□□□□ -1.39
SRP54-211ENST00000556445 ARNTLO00327 626 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 EVA1CP58658 441 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 SLC10A6Q3KNW5 377 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 ODR4Q5SWX8 454 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 TMEFF1Q8IYR6 380 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 PANK1Q8TE04 598 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 DPF3Q92784 378 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 A0A1W2PP64 1363 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 METP08581 1390 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 ADAMTS13Q76LX8 1427 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 ADGRB2O60241 1585 aa6.38□□□□□ -1.39
SRP54-211ENST00000556445 PTCH1Q13635 1447 aa6.37□□□□□ -1.39
SRP54-211ENST00000556445 EDC4Q6P2E9 1401 aaKnown RBP6.37□□□□□ -1.39
SRP54-211ENST00000556445 RNF123Q5XPI4 1314 aa6.37□□□□□ -1.39
SRP54-211ENST00000556445 ZC3H12DA2A288 527 aaKnown RBP6.37□□□□□ -1.39
SRP54-211ENST00000556445 F8W031 263 aaPredicted RBP6.37□□□□□ -1.39
SRP54-211ENST00000556445 NPHS1O60500 1241 aa6.37□□□□□ -1.39
SRP54-211ENST00000556445 SCG5P05408 212 aa6.37□□□□□ -1.39
SRP54-211ENST00000556445 VIL1P09327 827 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms