RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 CPVLQ9H3G5 476 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 DDX19AQ9NUU7 478 aaKnown RBP12.59□□□□□ -0.39
CHGA-205ENST00000556098 HDAC6Q9UBN7 1215 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 CEP131Q9UPN4 1083 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 FSD2A1L4K1 749 aa12.58□□□□□ -0.4
CHGA-205ENST00000556098 PARP1P09874 1014 aaKnown RBP12.58□□□□□ -0.4
CHGA-205ENST00000556098 PSEN2P49810 448 aa12.58□□□□□ -0.4
CHGA-205ENST00000556098 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.4
CHGA-205ENST00000556098 PFKFB3Q16875 520 aaPredicted RBP12.58□□□□□ -0.4
CHGA-205ENST00000556098 GPATCH4Q5T3I0 446 aaKnown RBP12.58□□□□□ -0.4
CHGA-205ENST00000556098 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
CHGA-205ENST00000556098 TEX2Q8IWB9 1127 aa12.58□□□□□ -0.4
CHGA-205ENST00000556098 LMCD1Q9NZU5 365 aa12.58□□□□□ -0.4
CHGA-205ENST00000556098 MUC6Q6W4X9 2439 aa12.58□□□□□ -0.4
CHGA-205ENST00000556098 ABHD14A-ACY1A0A1B0GW23 586 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 A0A1W2PQ27 194 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 A0A1W2PQ64 194 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 PALM3A6NDB9 673 aaPredicted RBP12.57□□□□□ -0.4
CHGA-205ENST00000556098 PPP6R2O75170 966 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 AMHP03971 560 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 SCG2P13521 617 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 EIF2AK2P19525 551 aaKnown RBP12.57□□□□□ -0.4
CHGA-205ENST00000556098 TRAPPC10P48553 1259 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 MFSD10Q14728 455 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 GPNMBQ14956 572 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 PTPROQ16827 1216 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 ZSCAN23Q3MJ62 389 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 ZNF618Q5T7W0 954 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 RAB11FIP4Q86YS3 637 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 NOSTRINQ8IVI9 506 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 TAAR1Q96RJ0 339 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 UBA5Q9GZZ9 404 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 CLDND1Q9NY35 253 aa12.57□□□□□ -0.4
CHGA-205ENST00000556098 BAZ2BQ9UIF8 2168 aaKnown RBP12.57□□□□□ -0.4
CHGA-205ENST00000556098 LOC102724159A0A0B4J2E5 919 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 DCXO43602 365 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 PDHBP11177 359 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 KRT2P35908 639 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 THPOP40225 353 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 NHLH1Q02575 133 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 ARHGAP1Q07960 439 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 GPM6BQ13491 265 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 STK38Q15208 465 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 PWP2Q15269 919 aaKnown RBP12.56□□□□□ -0.4
CHGA-205ENST00000556098 DGKDQ16760 1214 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 KIAA0753Q2KHM9 967 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 TCEAL5Q5H9L2 206 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 ARHGEF16Q5VV41 709 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 ADALQ6DHV7 355 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 DIS3L2Q8IYB7 885 aaKnown RBP12.56□□□□□ -0.4
CHGA-205ENST00000556098 DAGLBQ8NCG7 672 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 DNERQ8NFT8 737 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 KAT2BQ92831 832 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 WNT8BQ93098 351 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 YME1L1Q96TA2 773 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 PHF20Q9BVI0 1012 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 GDPD2Q9HCC8 539 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
CHGA-205ENST00000556098 GTF2IRD1Q9UHL9 959 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 MAD2L2Q9UI95 211 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 NOL7Q9UMY1 257 aaKnown RBP12.56□□□□□ -0.4
CHGA-205ENST00000556098 INSL6Q9Y581 213 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 KMT2EQ8IZD2 1858 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 PLXNA4Q9HCM2 1894 aa12.56□□□□□ -0.4
CHGA-205ENST00000556098 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.55□□□□□ -0.4
CHGA-205ENST00000556098 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 EFCAB14O75071 495 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 LGR5O75473 907 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 PLEKHA8P1O95397 391 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 CTSHP09668 335 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 MYCLP12524 364 aaPredicted RBP12.55□□□□□ -0.4
CHGA-205ENST00000556098 EDNRBP24530 442 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 DEKP35659 375 aaKnown RBP12.55□□□□□ -0.4
CHGA-205ENST00000556098 GUCY1B3Q02153 619 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 PKN1Q16512 942 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 CDC37Q16543 378 aaPredicted RBP12.55□□□□□ -0.4
CHGA-205ENST00000556098 FOXD4L6Q3SYB3 417 aaPredicted RBP12.55□□□□□ -0.4
CHGA-205ENST00000556098 EPC2Q52LR7 807 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 PPP1R18Q6NYC8 613 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 LRSAM1Q6UWE0 723 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 BTNL9Q6UXG8 535 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 FOXD4L3Q6VB84 417 aaPredicted RBP12.55□□□□□ -0.4
CHGA-205ENST00000556098 CCDC73Q6ZRK6 1079 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 SRBD1Q8N5C6 995 aaKnown RBP12.55□□□□□ -0.4
CHGA-205ENST00000556098 LINC00301Q8NCQ3 95 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 BANK1Q8NDB2 785 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 FBXL18Q96ME1 805 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 CTAGE1Q96RT6 745 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 KATNAL1Q9BW62 490 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 VAT1LQ9HCJ6 419 aa12.55□□□□□ -0.4
CHGA-205ENST00000556098 SEC63Q9UGP8 760 aaKnown RBP12.55□□□□□ -0.4
CHGA-205ENST00000556098 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 SPTLC2O15270 562 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 PARNO95453 639 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms